Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav7-2Q5R1I3 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav7-2Q5R1I3 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav7-2Q5R1I3 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trav7-2Q5R1I3 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trav7-2Q5R1I3 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trav7-2Q5R1I3 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trav7-2Q5R1I3 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC17.78■□□□□ 0.44
Trav7-2Q5R1I3 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav7-2Q5R1I3 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav7-2Q5R1I3 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav7-2Q5R1I3 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC17.75■□□□□ 0.43
Trav7-2Q5R1I3 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav7-2Q5R1I3 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC17.75■□□□□ 0.43
Trav7-2Q5R1I3 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav7-2Q5R1I3 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav7-2Q5R1I3 AC153890.1-201ENSMUST00000220021 2469 ntBASIC17.75■□□□□ 0.43
Trav7-2Q5R1I3 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trav7-2Q5R1I3 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trav7-2Q5R1I3 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Trav7-2Q5R1I3 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC17.74■□□□□ 0.43
Trav7-2Q5R1I3 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Trav7-2Q5R1I3 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav7-2Q5R1I3 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav7-2Q5R1I3 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trav7-2Q5R1I3 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
Trav7-2Q5R1I3 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav7-2Q5R1I3 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav7-2Q5R1I3 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav7-2Q5R1I3 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC17.72■□□□□ 0.43
Trav7-2Q5R1I3 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trav7-2Q5R1I3 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav7-2Q5R1I3 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trav7-2Q5R1I3 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav7-2Q5R1I3 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Trav7-2Q5R1I3 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav7-2Q5R1I3 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav7-2Q5R1I3 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav7-2Q5R1I3 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trav7-2Q5R1I3 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC17.7■□□□□ 0.42
Trav7-2Q5R1I3 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav7-2Q5R1I3 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Trav7-2Q5R1I3 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Trav7-2Q5R1I3 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC17.7■□□□□ 0.42
Trav7-2Q5R1I3 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC17.7■□□□□ 0.42
Trav7-2Q5R1I3 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav7-2Q5R1I3 Gm9397-201ENSMUST00000200125 605 ntBASIC17.68■□□□□ 0.42
Trav7-2Q5R1I3 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav7-2Q5R1I3 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Trav7-2Q5R1I3 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Trav7-2Q5R1I3 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.67■□□□□ 0.42
Trav7-2Q5R1I3 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav7-2Q5R1I3 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trav7-2Q5R1I3 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav7-2Q5R1I3 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Trav7-2Q5R1I3 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav7-2Q5R1I3 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav7-2Q5R1I3 Fezf2-202ENSMUST00000224023 1917 ntBASIC17.66■□□□□ 0.42
Trav7-2Q5R1I3 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav7-2Q5R1I3 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Trav7-2Q5R1I3 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trav7-2Q5R1I3 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.42
Trav7-2Q5R1I3 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav7-2Q5R1I3 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav7-2Q5R1I3 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trav7-2Q5R1I3 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav7-2Q5R1I3 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav7-2Q5R1I3 Gm24970-201ENSMUST00000175582 82 ntBASIC17.62■□□□□ 0.41
Trav7-2Q5R1I3 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC17.62■□□□□ 0.41
Trav7-2Q5R1I3 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC17.62■□□□□ 0.41
Trav7-2Q5R1I3 Gm43863-201ENSMUST00000203822 1192 ntBASIC17.62■□□□□ 0.41
Trav7-2Q5R1I3 Gm45855-201ENSMUST00000212546 880 ntBASIC17.62■□□□□ 0.41
Trav7-2Q5R1I3 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trav7-2Q5R1I3 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC17.62■□□□□ 0.41
Trav7-2Q5R1I3 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav7-2Q5R1I3 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav7-2Q5R1I3 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav7-2Q5R1I3 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav7-2Q5R1I3 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav7-2Q5R1I3 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC17.61■□□□□ 0.41
Trav7-2Q5R1I3 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Trav7-2Q5R1I3 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trav7-2Q5R1I3 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trav7-2Q5R1I3 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC17.59■□□□□ 0.41
Trav7-2Q5R1I3 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC17.59■□□□□ 0.41
Trav7-2Q5R1I3 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav7-2Q5R1I3 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC17.59■□□□□ 0.41
Trav7-2Q5R1I3 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC17.58■□□□□ 0.4
Trav7-2Q5R1I3 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav7-2Q5R1I3 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trav7-2Q5R1I3 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC17.57■□□□□ 0.4
Trav7-2Q5R1I3 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav7-2Q5R1I3 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trav7-2Q5R1I3 AC157572.2-201ENSMUST00000226970 908 ntBASIC17.57■□□□□ 0.4
Trav7-2Q5R1I3 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav7-2Q5R1I3 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trav7-2Q5R1I3 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Trav7-2Q5R1I3 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav7-2Q5R1I3 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC17.56■□□□□ 0.4
Trav7-2Q5R1I3 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms