Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
Shank3Q4ACU6 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
Shank3Q4ACU6 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Shank3Q4ACU6 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Shank3Q4ACU6 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC31.8■■■□□ 2.68
Shank3Q4ACU6 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Shank3Q4ACU6 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC31.77■■■□□ 2.68
Shank3Q4ACU6 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC31.77■■■□□ 2.68
Shank3Q4ACU6 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
Shank3Q4ACU6 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC31.76■■■□□ 2.67
Shank3Q4ACU6 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC31.75■■■□□ 2.67
Shank3Q4ACU6 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC31.74■■■□□ 2.67
Shank3Q4ACU6 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Shank3Q4ACU6 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC31.73■■■□□ 2.67
Shank3Q4ACU6 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
Shank3Q4ACU6 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Shank3Q4ACU6 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
Shank3Q4ACU6 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
Shank3Q4ACU6 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC31.69■■■□□ 2.66
Shank3Q4ACU6 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC31.69■■■□□ 2.66
Shank3Q4ACU6 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Shank3Q4ACU6 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
Shank3Q4ACU6 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
Shank3Q4ACU6 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC31.64■■■□□ 2.66
Shank3Q4ACU6 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
Shank3Q4ACU6 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
Shank3Q4ACU6 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Shank3Q4ACU6 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC31.63■■■□□ 2.65
Shank3Q4ACU6 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Shank3Q4ACU6 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC31.61■■■□□ 2.65
Shank3Q4ACU6 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC31.61■■■□□ 2.65
Shank3Q4ACU6 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC31.59■■■□□ 2.65
Shank3Q4ACU6 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC31.58■■■□□ 2.65
Shank3Q4ACU6 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC31.56■■■□□ 2.64
Shank3Q4ACU6 Gm6345-201ENSMUST00000180378 1691 ntBASIC31.56■■■□□ 2.64
Shank3Q4ACU6 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC31.55■■■□□ 2.64
Shank3Q4ACU6 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Shank3Q4ACU6 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
Shank3Q4ACU6 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Shank3Q4ACU6 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC31.53■■■□□ 2.64
Shank3Q4ACU6 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Shank3Q4ACU6 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Shank3Q4ACU6 Cap2-205ENSMUST00000225824 1634 ntBASIC31.51■■■□□ 2.64
Shank3Q4ACU6 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC31.51■■■□□ 2.63
Shank3Q4ACU6 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC31.5■■■□□ 2.63
Shank3Q4ACU6 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Shank3Q4ACU6 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC31.47■■■□□ 2.63
Shank3Q4ACU6 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Shank3Q4ACU6 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC31.46■■■□□ 2.63
Shank3Q4ACU6 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC31.45■■■□□ 2.63
Shank3Q4ACU6 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC31.44■■■□□ 2.62
Shank3Q4ACU6 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Shank3Q4ACU6 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC31.43■■■□□ 2.62
Shank3Q4ACU6 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Shank3Q4ACU6 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
Shank3Q4ACU6 AC131739.1-201ENSMUST00000221692 1245 ntBASIC31.41■■■□□ 2.62
Shank3Q4ACU6 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Shank3Q4ACU6 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC31.39■■■□□ 2.62
Shank3Q4ACU6 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Shank3Q4ACU6 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC31.38■■■□□ 2.61
Shank3Q4ACU6 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC31.38■■■□□ 2.61
Shank3Q4ACU6 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC31.35■■■□□ 2.61
Shank3Q4ACU6 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC31.35■■■□□ 2.61
Shank3Q4ACU6 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
Shank3Q4ACU6 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Shank3Q4ACU6 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Shank3Q4ACU6 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Shank3Q4ACU6 AC167019.3-201ENSMUST00000228225 1266 ntBASIC31.32■■■□□ 2.61
Shank3Q4ACU6 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.61
Shank3Q4ACU6 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Shank3Q4ACU6 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
Shank3Q4ACU6 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC31.31■■■□□ 2.6
Shank3Q4ACU6 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
Shank3Q4ACU6 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC31.3■■■□□ 2.6
Shank3Q4ACU6 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC31.3■■■□□ 2.6
Shank3Q4ACU6 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC31.29■■■□□ 2.6
Shank3Q4ACU6 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC31.29■■■□□ 2.6
Shank3Q4ACU6 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC31.29■■■□□ 2.6
Shank3Q4ACU6 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Shank3Q4ACU6 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC31.28■■■□□ 2.6
Shank3Q4ACU6 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC31.28■■■□□ 2.6
Shank3Q4ACU6 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Shank3Q4ACU6 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC31.27■■■□□ 2.6
Shank3Q4ACU6 Gm6311-201ENSMUST00000073790 878 ntBASIC31.27■■■□□ 2.6
Shank3Q4ACU6 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
Shank3Q4ACU6 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
Shank3Q4ACU6 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC31.26■■■□□ 2.59
Shank3Q4ACU6 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Shank3Q4ACU6 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Shank3Q4ACU6 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC31.24■■■□□ 2.59
Shank3Q4ACU6 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC31.24■■■□□ 2.59
Shank3Q4ACU6 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC31.24■■■□□ 2.59
Shank3Q4ACU6 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
Shank3Q4ACU6 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
Shank3Q4ACU6 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC31.22■■■□□ 2.59
Shank3Q4ACU6 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC31.22■■■□□ 2.59
Shank3Q4ACU6 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC31.21■■■□□ 2.59
Shank3Q4ACU6 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
Shank3Q4ACU6 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Shank3Q4ACU6 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC31.2■■■□□ 2.59
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms