Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Znf48Q3US17 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Znf48Q3US17 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Znf48Q3US17 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Znf48Q3US17 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Znf48Q3US17 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Znf48Q3US17 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Znf48Q3US17 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Znf48Q3US17 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC19.56■□□□□ 0.72
Znf48Q3US17 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.56■□□□□ 0.72
Znf48Q3US17 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.56■□□□□ 0.72
Znf48Q3US17 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Znf48Q3US17 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Znf48Q3US17 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Znf48Q3US17 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Znf48Q3US17 Nkain2-201ENSMUST00000092602 558 ntBASIC19.55■□□□□ 0.72
Znf48Q3US17 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Znf48Q3US17 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Znf48Q3US17 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Znf48Q3US17 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.55■□□□□ 0.72
Znf48Q3US17 Gm7432-201ENSMUST00000210343 879 ntBASIC19.54■□□□□ 0.72
Znf48Q3US17 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Znf48Q3US17 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Znf48Q3US17 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Znf48Q3US17 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
Znf48Q3US17 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Znf48Q3US17 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Znf48Q3US17 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Znf48Q3US17 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Znf48Q3US17 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Znf48Q3US17 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Znf48Q3US17 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Znf48Q3US17 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Znf48Q3US17 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Znf48Q3US17 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Znf48Q3US17 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Znf48Q3US17 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Znf48Q3US17 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Znf48Q3US17 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.49■□□□□ 0.71
Znf48Q3US17 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Znf48Q3US17 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Znf48Q3US17 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.48■□□□□ 0.71
Znf48Q3US17 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.47■□□□□ 0.71
Znf48Q3US17 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Znf48Q3US17 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Znf48Q3US17 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Znf48Q3US17 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Znf48Q3US17 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Znf48Q3US17 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Znf48Q3US17 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Znf48Q3US17 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Znf48Q3US17 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Znf48Q3US17 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Znf48Q3US17 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Znf48Q3US17 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Znf48Q3US17 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Znf48Q3US17 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.44■□□□□ 0.7
Znf48Q3US17 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Znf48Q3US17 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Znf48Q3US17 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Znf48Q3US17 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Znf48Q3US17 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Znf48Q3US17 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Znf48Q3US17 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Znf48Q3US17 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Znf48Q3US17 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Znf48Q3US17 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Znf48Q3US17 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Znf48Q3US17 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Znf48Q3US17 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Znf48Q3US17 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.4■□□□□ 0.7
Znf48Q3US17 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Znf48Q3US17 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Znf48Q3US17 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Znf48Q3US17 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Znf48Q3US17 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Znf48Q3US17 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Znf48Q3US17 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC19.38■□□□□ 0.69
Znf48Q3US17 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Znf48Q3US17 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Znf48Q3US17 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Znf48Q3US17 Gm11599-201ENSMUST00000118720 878 ntBASIC19.37■□□□□ 0.69
Znf48Q3US17 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
Znf48Q3US17 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Znf48Q3US17 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Znf48Q3US17 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Znf48Q3US17 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Znf48Q3US17 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Znf48Q3US17 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Znf48Q3US17 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Znf48Q3US17 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
Znf48Q3US17 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Znf48Q3US17 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Znf48Q3US17 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Znf48Q3US17 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Znf48Q3US17 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Znf48Q3US17 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Znf48Q3US17 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Znf48Q3US17 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Znf48Q3US17 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms