Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Znf48Q3US17 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Znf48Q3US17 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Znf48Q3US17 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Znf48Q3US17 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Znf48Q3US17 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Znf48Q3US17 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Znf48Q3US17 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Znf48Q3US17 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC19.56■□□□□ 0.72
Znf48Q3US17 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.56■□□□□ 0.72
Znf48Q3US17 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.56■□□□□ 0.72
Znf48Q3US17 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Znf48Q3US17 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Znf48Q3US17 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Znf48Q3US17 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Znf48Q3US17 Nkain2-201ENSMUST00000092602 558 ntBASIC19.55■□□□□ 0.72
Znf48Q3US17 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Znf48Q3US17 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Znf48Q3US17 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Znf48Q3US17 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.55■□□□□ 0.72
Znf48Q3US17 Gm7432-201ENSMUST00000210343 879 ntBASIC19.54■□□□□ 0.72
Znf48Q3US17 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Znf48Q3US17 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Znf48Q3US17 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Znf48Q3US17 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
Znf48Q3US17 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Znf48Q3US17 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Znf48Q3US17 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Znf48Q3US17 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Znf48Q3US17 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Znf48Q3US17 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Znf48Q3US17 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Znf48Q3US17 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Znf48Q3US17 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Znf48Q3US17 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Znf48Q3US17 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Znf48Q3US17 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Znf48Q3US17 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Znf48Q3US17 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.49■□□□□ 0.71
Znf48Q3US17 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Znf48Q3US17 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Znf48Q3US17 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.48■□□□□ 0.71
Znf48Q3US17 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.47■□□□□ 0.71
Znf48Q3US17 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Znf48Q3US17 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Znf48Q3US17 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Znf48Q3US17 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Znf48Q3US17 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Znf48Q3US17 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Znf48Q3US17 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Znf48Q3US17 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Znf48Q3US17 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Znf48Q3US17 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Znf48Q3US17 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Znf48Q3US17 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Znf48Q3US17 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Znf48Q3US17 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.44■□□□□ 0.7
Znf48Q3US17 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Znf48Q3US17 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Znf48Q3US17 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Znf48Q3US17 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Znf48Q3US17 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Znf48Q3US17 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Znf48Q3US17 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Znf48Q3US17 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Znf48Q3US17 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Znf48Q3US17 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Znf48Q3US17 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Znf48Q3US17 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Znf48Q3US17 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Znf48Q3US17 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.4■□□□□ 0.7
Znf48Q3US17 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Znf48Q3US17 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Znf48Q3US17 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Znf48Q3US17 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Znf48Q3US17 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Znf48Q3US17 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Znf48Q3US17 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC19.38■□□□□ 0.69
Znf48Q3US17 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Znf48Q3US17 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Znf48Q3US17 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Znf48Q3US17 Gm11599-201ENSMUST00000118720 878 ntBASIC19.37■□□□□ 0.69
Znf48Q3US17 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
Znf48Q3US17 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Znf48Q3US17 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Znf48Q3US17 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Znf48Q3US17 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Znf48Q3US17 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Znf48Q3US17 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Znf48Q3US17 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Znf48Q3US17 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
Znf48Q3US17 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Znf48Q3US17 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Znf48Q3US17 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Znf48Q3US17 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Znf48Q3US17 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Znf48Q3US17 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Znf48Q3US17 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Znf48Q3US17 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Znf48Q3US17 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms