Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PrkdcP97313 Gm30346-201ENSMUST00000218641 1699 ntBASIC17.61■□□□□ 0.41
PrkdcP97313 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PrkdcP97313 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC17.61■□□□□ 0.41
PrkdcP97313 AC167019.3-201ENSMUST00000228225 1266 ntBASIC17.61■□□□□ 0.41
PrkdcP97313 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC17.61■□□□□ 0.41
PrkdcP97313 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PrkdcP97313 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PrkdcP97313 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
PrkdcP97313 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PrkdcP97313 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC17.59■□□□□ 0.41
PrkdcP97313 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PrkdcP97313 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PrkdcP97313 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PrkdcP97313 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
PrkdcP97313 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
PrkdcP97313 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PrkdcP97313 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PrkdcP97313 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PrkdcP97313 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PrkdcP97313 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PrkdcP97313 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC17.57■□□□□ 0.4
PrkdcP97313 Gm12366-201ENSMUST00000121722 873 ntBASIC17.57■□□□□ 0.4
PrkdcP97313 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC17.57■□□□□ 0.4
PrkdcP97313 Gm5812-201ENSMUST00000061073 957 ntBASIC17.57■□□□□ 0.4
PrkdcP97313 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC17.57■□□□□ 0.4
PrkdcP97313 Gm5786-201ENSMUST00000085368 882 ntBASIC17.57■□□□□ 0.4
PrkdcP97313 Gm4799-201ENSMUST00000095396 657 ntBASIC17.56■□□□□ 0.4
PrkdcP97313 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PrkdcP97313 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PrkdcP97313 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PrkdcP97313 Gm6345-201ENSMUST00000180378 1691 ntBASIC17.55■□□□□ 0.4
PrkdcP97313 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
PrkdcP97313 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PrkdcP97313 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PrkdcP97313 AC131739.1-201ENSMUST00000221692 1245 ntBASIC17.54■□□□□ 0.4
PrkdcP97313 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC17.53■□□□□ 0.4
PrkdcP97313 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PrkdcP97313 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PrkdcP97313 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PrkdcP97313 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC17.52■□□□□ 0.4
PrkdcP97313 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
PrkdcP97313 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PrkdcP97313 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PrkdcP97313 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PrkdcP97313 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
PrkdcP97313 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC17.48■□□□□ 0.39
PrkdcP97313 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
PrkdcP97313 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC17.48■□□□□ 0.39
PrkdcP97313 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PrkdcP97313 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PrkdcP97313 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC17.47■□□□□ 0.39
PrkdcP97313 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PrkdcP97313 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PrkdcP97313 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PrkdcP97313 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC17.46■□□□□ 0.39
PrkdcP97313 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC17.46■□□□□ 0.39
PrkdcP97313 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC17.46■□□□□ 0.39
PrkdcP97313 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PrkdcP97313 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PrkdcP97313 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PrkdcP97313 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PrkdcP97313 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC17.45■□□□□ 0.38
PrkdcP97313 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PrkdcP97313 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC17.45■□□□□ 0.38
PrkdcP97313 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PrkdcP97313 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PrkdcP97313 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PrkdcP97313 Scarna2-201ENSMUST00000157560 414 ntBASIC17.42■□□□□ 0.38
PrkdcP97313 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
PrkdcP97313 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC17.42■□□□□ 0.38
PrkdcP97313 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PrkdcP97313 Gm9806-201ENSMUST00000051080 552 ntBASIC17.41■□□□□ 0.38
PrkdcP97313 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC17.4■□□□□ 0.38
PrkdcP97313 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PrkdcP97313 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PrkdcP97313 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PrkdcP97313 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
PrkdcP97313 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC17.39■□□□□ 0.37
PrkdcP97313 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PrkdcP97313 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC17.38■□□□□ 0.37
PrkdcP97313 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PrkdcP97313 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PrkdcP97313 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PrkdcP97313 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PrkdcP97313 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PrkdcP97313 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC17.36■□□□□ 0.37
PrkdcP97313 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PrkdcP97313 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PrkdcP97313 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PrkdcP97313 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
PrkdcP97313 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PrkdcP97313 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC17.35■□□□□ 0.37
PrkdcP97313 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PrkdcP97313 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PrkdcP97313 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PrkdcP97313 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PrkdcP97313 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PrkdcP97313 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC17.33■□□□□ 0.37
PrkdcP97313 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 466 ms