Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Sox5P35710 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
Sox5P35710 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Sox5P35710 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
Sox5P35710 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC26.65■■□□□ 1.86
Sox5P35710 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
Sox5P35710 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Sox5P35710 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC26.63■■□□□ 1.85
Sox5P35710 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Sox5P35710 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Sox5P35710 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Sox5P35710 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
Sox5P35710 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC26.6■■□□□ 1.85
Sox5P35710 Pcf11-205ENSMUST00000208255 1720 ntBASIC26.6■■□□□ 1.85
Sox5P35710 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Sox5P35710 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Sox5P35710 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC26.59■■□□□ 1.85
Sox5P35710 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Sox5P35710 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC26.57■■□□□ 1.84
Sox5P35710 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Sox5P35710 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Sox5P35710 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Sox5P35710 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Sox5P35710 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Sox5P35710 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Sox5P35710 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Sox5P35710 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
Sox5P35710 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Sox5P35710 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
Sox5P35710 Gm16148-201ENSMUST00000119653 893 ntBASIC26.54■■□□□ 1.84
Sox5P35710 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Sox5P35710 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Sox5P35710 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Sox5P35710 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC26.51■■□□□ 1.83
Sox5P35710 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Sox5P35710 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Sox5P35710 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Sox5P35710 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Sox5P35710 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Sox5P35710 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
Sox5P35710 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
Sox5P35710 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
Sox5P35710 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Sox5P35710 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC26.49■■□□□ 1.83
Sox5P35710 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Sox5P35710 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC26.48■■□□□ 1.83
Sox5P35710 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Sox5P35710 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Sox5P35710 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
Sox5P35710 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Sox5P35710 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC26.46■■□□□ 1.83
Sox5P35710 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC26.46■■□□□ 1.83
Sox5P35710 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Sox5P35710 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
Sox5P35710 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
Sox5P35710 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
Sox5P35710 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
Sox5P35710 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC26.45■■□□□ 1.82
Sox5P35710 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Sox5P35710 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC26.45■■□□□ 1.82
Sox5P35710 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Sox5P35710 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Sox5P35710 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC26.44■■□□□ 1.82
Sox5P35710 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC26.42■■□□□ 1.82
Sox5P35710 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Sox5P35710 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
Sox5P35710 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
Sox5P35710 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Sox5P35710 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Sox5P35710 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Sox5P35710 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
Sox5P35710 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
Sox5P35710 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
Sox5P35710 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Sox5P35710 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Sox5P35710 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Sox5P35710 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Sox5P35710 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Sox5P35710 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC26.3■■□□□ 1.8
Sox5P35710 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Sox5P35710 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Sox5P35710 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Sox5P35710 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Sox5P35710 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Sox5P35710 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Sox5P35710 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Sox5P35710 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC26.26■■□□□ 1.79
Sox5P35710 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Sox5P35710 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Sox5P35710 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Sox5P35710 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
Sox5P35710 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Sox5P35710 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Sox5P35710 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC26.23■■□□□ 1.79
Sox5P35710 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Sox5P35710 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC26.22■■□□□ 1.79
Sox5P35710 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Sox5P35710 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC26.22■■□□□ 1.79
Sox5P35710 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
Sox5P35710 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms