Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Sod1P08228 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC23.63■■□□□ 1.37
Sod1P08228 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
Sod1P08228 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Sod1P08228 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Sod1P08228 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC23.61■■□□□ 1.37
Sod1P08228 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC23.61■■□□□ 1.37
Sod1P08228 Gm11599-201ENSMUST00000118720 878 ntBASIC23.6■■□□□ 1.37
Sod1P08228 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
Sod1P08228 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Sod1P08228 Gm6345-201ENSMUST00000180378 1691 ntBASIC23.6■■□□□ 1.37
Sod1P08228 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Sod1P08228 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Sod1P08228 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Sod1P08228 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC23.58■■□□□ 1.37
Sod1P08228 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Sod1P08228 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Sod1P08228 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC23.57■■□□□ 1.36
Sod1P08228 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC23.57■■□□□ 1.36
Sod1P08228 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC23.57■■□□□ 1.36
Sod1P08228 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC23.56■■□□□ 1.36
Sod1P08228 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Sod1P08228 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC23.55■■□□□ 1.36
Sod1P08228 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Sod1P08228 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Sod1P08228 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC23.54■■□□□ 1.36
Sod1P08228 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
Sod1P08228 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Sod1P08228 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Sod1P08228 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Sod1P08228 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Sod1P08228 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Sod1P08228 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC23.5■■□□□ 1.35
Sod1P08228 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Sod1P08228 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC23.49■■□□□ 1.35
Sod1P08228 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC23.49■■□□□ 1.35
Sod1P08228 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Sod1P08228 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
Sod1P08228 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Sod1P08228 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
Sod1P08228 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
Sod1P08228 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Sod1P08228 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
Sod1P08228 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC23.45■■□□□ 1.34
Sod1P08228 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC23.45■■□□□ 1.34
Sod1P08228 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC23.43■■□□□ 1.34
Sod1P08228 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC23.43■■□□□ 1.34
Sod1P08228 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Sod1P08228 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Sod1P08228 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
Sod1P08228 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
Sod1P08228 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Sod1P08228 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Sod1P08228 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Sod1P08228 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC23.4■■□□□ 1.34
Sod1P08228 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Sod1P08228 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Sod1P08228 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
Sod1P08228 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Sod1P08228 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Sod1P08228 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC23.35■■□□□ 1.33
Sod1P08228 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Sod1P08228 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Sod1P08228 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Sod1P08228 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
Sod1P08228 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Sod1P08228 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Sod1P08228 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
Sod1P08228 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Sod1P08228 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.32
Sod1P08228 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC23.32■■□□□ 1.32
Sod1P08228 AC131739.1-201ENSMUST00000221692 1245 ntBASIC23.32■■□□□ 1.32
Sod1P08228 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
Sod1P08228 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Sod1P08228 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC23.31■■□□□ 1.32
Sod1P08228 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC23.31■■□□□ 1.32
Sod1P08228 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Sod1P08228 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Sod1P08228 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Sod1P08228 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Sod1P08228 Gm30023-201ENSMUST00000197970 889 ntBASIC23.3■■□□□ 1.32
Sod1P08228 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
Sod1P08228 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Sod1P08228 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Sod1P08228 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC23.28■■□□□ 1.32
Sod1P08228 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Sod1P08228 Gm11175-201ENSMUST00000116172 543 ntBASIC23.27■■□□□ 1.32
Sod1P08228 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
Sod1P08228 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Sod1P08228 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Sod1P08228 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Sod1P08228 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Sod1P08228 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Sod1P08228 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC23.23■■□□□ 1.31
Sod1P08228 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC23.23■■□□□ 1.31
Sod1P08228 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Sod1P08228 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC23.23■■□□□ 1.31
Sod1P08228 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Sod1P08228 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Sod1P08228 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms