Protein–RNA interactions for Protein: P04756

Chrna1, Acetylcholine receptor subunit alpha, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna1P04756 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC26.73■■□□□ 1.87
Chrna1P04756 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC26.73■■□□□ 1.87
Chrna1P04756 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Chrna1P04756 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Chrna1P04756 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC26.7■■□□□ 1.86
Chrna1P04756 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Chrna1P04756 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC26.69■■□□□ 1.86
Chrna1P04756 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Chrna1P04756 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Chrna1P04756 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Chrna1P04756 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC26.66■■□□□ 1.86
Chrna1P04756 AC153504.1-201ENSMUST00000218379 2290 ntBASIC26.66■■□□□ 1.86
Chrna1P04756 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC26.66■■□□□ 1.86
Chrna1P04756 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Chrna1P04756 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Chrna1P04756 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC26.65■■□□□ 1.86
Chrna1P04756 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Chrna1P04756 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Chrna1P04756 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
Chrna1P04756 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC26.63■■□□□ 1.85
Chrna1P04756 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
Chrna1P04756 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC26.63■■□□□ 1.85
Chrna1P04756 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
Chrna1P04756 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC26.63■■□□□ 1.85
Chrna1P04756 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Chrna1P04756 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC26.62■■□□□ 1.85
Chrna1P04756 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Chrna1P04756 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
Chrna1P04756 Gm5987-201ENSMUST00000196433 1151 ntBASIC26.6■■□□□ 1.85
Chrna1P04756 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC26.6■■□□□ 1.85
Chrna1P04756 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC26.59■■□□□ 1.85
Chrna1P04756 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Chrna1P04756 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
Chrna1P04756 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Chrna1P04756 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Chrna1P04756 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC26.58■■□□□ 1.84
Chrna1P04756 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Chrna1P04756 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Chrna1P04756 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Chrna1P04756 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
Chrna1P04756 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Chrna1P04756 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Chrna1P04756 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Chrna1P04756 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Chrna1P04756 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Chrna1P04756 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Chrna1P04756 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Chrna1P04756 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC26.52■■□□□ 1.84
Chrna1P04756 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC26.52■■□□□ 1.84
Chrna1P04756 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Chrna1P04756 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
Chrna1P04756 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC26.51■■□□□ 1.83
Chrna1P04756 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC26.51■■□□□ 1.83
Chrna1P04756 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC26.51■■□□□ 1.83
Chrna1P04756 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Chrna1P04756 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Chrna1P04756 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Chrna1P04756 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Chrna1P04756 Zxda-201ENSMUST00000117281 2621 ntBASIC26.46■■□□□ 1.83
Chrna1P04756 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Chrna1P04756 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC26.45■■□□□ 1.82
Chrna1P04756 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Chrna1P04756 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
Chrna1P04756 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC26.44■■□□□ 1.82
Chrna1P04756 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
Chrna1P04756 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Chrna1P04756 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Chrna1P04756 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
Chrna1P04756 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
Chrna1P04756 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC26.42■■□□□ 1.82
Chrna1P04756 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Chrna1P04756 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC26.41■■□□□ 1.82
Chrna1P04756 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Chrna1P04756 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Chrna1P04756 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Chrna1P04756 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
Chrna1P04756 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
Chrna1P04756 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.82
Chrna1P04756 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Chrna1P04756 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC26.38■■□□□ 1.81
Chrna1P04756 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC26.38■■□□□ 1.81
Chrna1P04756 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Chrna1P04756 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Chrna1P04756 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
Chrna1P04756 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC26.36■■□□□ 1.81
Chrna1P04756 Gm7432-201ENSMUST00000210343 879 ntBASIC26.36■■□□□ 1.81
Chrna1P04756 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Chrna1P04756 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
Chrna1P04756 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Chrna1P04756 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
Chrna1P04756 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC26.34■■□□□ 1.81
Chrna1P04756 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC26.34■■□□□ 1.81
Chrna1P04756 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Chrna1P04756 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC26.34■■□□□ 1.81
Chrna1P04756 Gm30023-201ENSMUST00000197970 889 ntBASIC26.34■■□□□ 1.81
Chrna1P04756 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Chrna1P04756 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
Chrna1P04756 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Chrna1P04756 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Chrna1P04756 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms