Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC31.11■■■□□ 2.57
Col4a1P02463 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
Col4a1P02463 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Col4a1P02463 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC31.09■■■□□ 2.57
Col4a1P02463 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
Col4a1P02463 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC31.08■■■□□ 2.57
Col4a1P02463 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
Col4a1P02463 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC31.07■■■□□ 2.56
Col4a1P02463 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Col4a1P02463 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC31.06■■■□□ 2.56
Col4a1P02463 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
Col4a1P02463 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Col4a1P02463 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Col4a1P02463 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC31.06■■■□□ 2.56
Col4a1P02463 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC31.06■■■□□ 2.56
Col4a1P02463 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC31.06■■■□□ 2.56
Col4a1P02463 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Col4a1P02463 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC31.04■■■□□ 2.56
Col4a1P02463 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC31.04■■■□□ 2.56
Col4a1P02463 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC31.02■■■□□ 2.56
Col4a1P02463 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC31.02■■■□□ 2.56
Col4a1P02463 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Col4a1P02463 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC31■■■□□ 2.55
Col4a1P02463 Gm6345-201ENSMUST00000180378 1691 ntBASIC30.99■■■□□ 2.55
Col4a1P02463 Gm7432-201ENSMUST00000210343 879 ntBASIC30.99■■■□□ 2.55
Col4a1P02463 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
Col4a1P02463 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
Col4a1P02463 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC30.95■■■□□ 2.55
Col4a1P02463 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
Col4a1P02463 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
Col4a1P02463 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC30.94■■■□□ 2.54
Col4a1P02463 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
Col4a1P02463 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC30.94■■■□□ 2.54
Col4a1P02463 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Col4a1P02463 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC30.93■■■□□ 2.54
Col4a1P02463 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC30.93■■■□□ 2.54
Col4a1P02463 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC30.93■■■□□ 2.54
Col4a1P02463 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC30.93■■■□□ 2.54
Col4a1P02463 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC30.92■■■□□ 2.54
Col4a1P02463 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
Col4a1P02463 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Col4a1P02463 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
Col4a1P02463 Gm11599-201ENSMUST00000118720 878 ntBASIC30.9■■■□□ 2.54
Col4a1P02463 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
Col4a1P02463 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC30.88■■■□□ 2.53
Col4a1P02463 Gm11175-201ENSMUST00000116172 543 ntBASIC30.87■■■□□ 2.53
Col4a1P02463 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
Col4a1P02463 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC30.83■■■□□ 2.53
Col4a1P02463 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC30.83■■■□□ 2.53
Col4a1P02463 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
Col4a1P02463 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
Col4a1P02463 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
Col4a1P02463 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
Col4a1P02463 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC30.81■■■□□ 2.52
Col4a1P02463 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC30.8■■■□□ 2.52
Col4a1P02463 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC30.8■■■□□ 2.52
Col4a1P02463 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC30.79■■■□□ 2.52
Col4a1P02463 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Col4a1P02463 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
Col4a1P02463 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
Col4a1P02463 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC30.78■■■□□ 2.52
Col4a1P02463 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC30.77■■■□□ 2.52
Col4a1P02463 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
Col4a1P02463 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC30.76■■■□□ 2.51
Col4a1P02463 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC30.76■■■□□ 2.51
Col4a1P02463 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC30.75■■■□□ 2.51
Col4a1P02463 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
Col4a1P02463 Gm30023-201ENSMUST00000197970 889 ntBASIC30.74■■■□□ 2.51
Col4a1P02463 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Col4a1P02463 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC30.74■■■□□ 2.51
Col4a1P02463 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC30.73■■■□□ 2.51
Col4a1P02463 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC30.72■■■□□ 2.51
Col4a1P02463 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Col4a1P02463 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Col4a1P02463 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
Col4a1P02463 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC30.69■■■□□ 2.5
Col4a1P02463 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC30.69■■■□□ 2.5
Col4a1P02463 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Col4a1P02463 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
Col4a1P02463 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC30.68■■■□□ 2.5
Col4a1P02463 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
Col4a1P02463 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Col4a1P02463 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Col4a1P02463 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Col4a1P02463 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
Col4a1P02463 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
Col4a1P02463 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
Col4a1P02463 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Col4a1P02463 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
Col4a1P02463 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC30.62■■■□□ 2.49
Col4a1P02463 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Col4a1P02463 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC30.62■■■□□ 2.49
Col4a1P02463 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Col4a1P02463 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Col4a1P02463 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC30.6■■■□□ 2.49
Col4a1P02463 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC30.59■■■□□ 2.49
Col4a1P02463 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
Col4a1P02463 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC30.58■■■□□ 2.49
Col4a1P02463 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Col4a1P02463 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC30.57■■■□□ 2.48
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms