Protein–RNA interactions for Protein: P01643

Ig kappa chain V-V region MOPC 173, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01643 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
P01643 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
P01643 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
P01643 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
P01643 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
P01643 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC19.53■□□□□ 0.72
P01643 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
P01643 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
P01643 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
P01643 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
P01643 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.52■□□□□ 0.72
P01643 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
P01643 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
P01643 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
P01643 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
P01643 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
P01643 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
P01643 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
P01643 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
P01643 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
P01643 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
P01643 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
P01643 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
P01643 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
P01643 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
P01643 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
P01643 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.45■□□□□ 0.7
P01643 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC19.45■□□□□ 0.7
P01643 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
P01643 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.44■□□□□ 0.7
P01643 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
P01643 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.42■□□□□ 0.7
P01643 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
P01643 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
P01643 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
P01643 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
P01643 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC19.39■□□□□ 0.7
P01643 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.39■□□□□ 0.69
P01643 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
P01643 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
P01643 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
P01643 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
P01643 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
P01643 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
P01643 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC19.37■□□□□ 0.69
P01643 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.37■□□□□ 0.69
P01643 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
P01643 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
P01643 Gm7432-201ENSMUST00000210343 879 ntBASIC19.37■□□□□ 0.69
P01643 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19.37■□□□□ 0.69
P01643 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC19.37■□□□□ 0.69
P01643 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
P01643 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.36■□□□□ 0.69
P01643 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
P01643 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
P01643 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
P01643 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
P01643 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
P01643 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
P01643 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
P01643 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.34■□□□□ 0.69
P01643 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
P01643 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
P01643 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
P01643 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
P01643 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
P01643 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.32■□□□□ 0.68
P01643 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
P01643 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
P01643 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
P01643 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
P01643 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
P01643 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
P01643 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
P01643 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
P01643 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.3■□□□□ 0.68
P01643 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.3■□□□□ 0.68
P01643 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
P01643 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
P01643 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.29■□□□□ 0.68
P01643 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
P01643 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
P01643 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
P01643 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19.26■□□□□ 0.67
P01643 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
P01643 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
P01643 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
P01643 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.25■□□□□ 0.67
P01643 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.25■□□□□ 0.67
P01643 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.25■□□□□ 0.67
P01643 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
P01643 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
P01643 Gm11599-201ENSMUST00000118720 878 ntBASIC19.24■□□□□ 0.67
P01643 Gm30023-201ENSMUST00000197970 889 ntBASIC19.24■□□□□ 0.67
P01643 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
P01643 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.23■□□□□ 0.67
P01643 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
P01643 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
P01643 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
P01643 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms