Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Alx4O35137 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Alx4O35137 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Alx4O35137 Gm26115-201ENSMUST00000175605 87 ntBASIC21.7■■□□□ 1.06
Alx4O35137 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Alx4O35137 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Alx4O35137 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Alx4O35137 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Alx4O35137 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Alx4O35137 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Alx4O35137 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Alx4O35137 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Alx4O35137 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC21.68■■□□□ 1.06
Alx4O35137 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Alx4O35137 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Alx4O35137 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.67■■□□□ 1.06
Alx4O35137 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Alx4O35137 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Alx4O35137 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Alx4O35137 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Alx4O35137 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.66■■□□□ 1.06
Alx4O35137 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Alx4O35137 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Alx4O35137 Gm8109-201ENSMUST00000194076 746 ntBASIC21.66■■□□□ 1.06
Alx4O35137 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Alx4O35137 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.65■■□□□ 1.06
Alx4O35137 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Alx4O35137 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Alx4O35137 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Alx4O35137 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Alx4O35137 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Alx4O35137 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Alx4O35137 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Alx4O35137 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Alx4O35137 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Alx4O35137 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.62■■□□□ 1.05
Alx4O35137 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Alx4O35137 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Alx4O35137 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Alx4O35137 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Alx4O35137 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Alx4O35137 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Alx4O35137 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Alx4O35137 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Alx4O35137 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Alx4O35137 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Alx4O35137 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Alx4O35137 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Alx4O35137 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Alx4O35137 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Alx4O35137 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.56■■□□□ 1.04
Alx4O35137 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Alx4O35137 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Alx4O35137 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Alx4O35137 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Alx4O35137 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.53■■□□□ 1.04
Alx4O35137 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Alx4O35137 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Alx4O35137 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Alx4O35137 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Alx4O35137 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Alx4O35137 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.03
Alx4O35137 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC21.51■■□□□ 1.03
Alx4O35137 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Alx4O35137 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Alx4O35137 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Alx4O35137 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Alx4O35137 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Alx4O35137 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Alx4O35137 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Alx4O35137 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Alx4O35137 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Alx4O35137 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Alx4O35137 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Alx4O35137 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.43■■□□□ 1.02
Alx4O35137 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Alx4O35137 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.43■■□□□ 1.02
Alx4O35137 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Alx4O35137 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC21.41■■□□□ 1.02
Alx4O35137 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Alx4O35137 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Alx4O35137 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Alx4O35137 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Alx4O35137 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Alx4O35137 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Alx4O35137 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
Alx4O35137 Gm16148-201ENSMUST00000119653 893 ntBASIC21.37■■□□□ 1.01
Alx4O35137 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Alx4O35137 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Alx4O35137 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Alx4O35137 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Alx4O35137 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Alx4O35137 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
Alx4O35137 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Alx4O35137 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Alx4O35137 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Alx4O35137 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Alx4O35137 Gm24804-201ENSMUST00000174982 85 ntBASIC21.34■■□□□ 1.01
Alx4O35137 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
Alx4O35137 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms