Protein–RNA interactions for Protein: O08852

Pkd1, Polycystin-1, mousemouse

Predictions only

Length 4,293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1O08852 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC16.18■□□□□ 0.18
Pkd1O08852 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC16.18■□□□□ 0.18
Pkd1O08852 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pkd1O08852 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pkd1O08852 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pkd1O08852 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Pkd1O08852 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pkd1O08852 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pkd1O08852 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pkd1O08852 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pkd1O08852 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pkd1O08852 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pkd1O08852 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pkd1O08852 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Pkd1O08852 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pkd1O08852 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pkd1O08852 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Pkd1O08852 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pkd1O08852 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC16.11■□□□□ 0.17
Pkd1O08852 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pkd1O08852 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pkd1O08852 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC16.11■□□□□ 0.17
Pkd1O08852 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pkd1O08852 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC16.1■□□□□ 0.17
Pkd1O08852 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pkd1O08852 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Pkd1O08852 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Pkd1O08852 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pkd1O08852 AC131739.1-201ENSMUST00000221692 1245 ntBASIC16.09■□□□□ 0.17
Pkd1O08852 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC16.09■□□□□ 0.17
Pkd1O08852 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pkd1O08852 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pkd1O08852 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Pkd1O08852 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pkd1O08852 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pkd1O08852 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pkd1O08852 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC16.08■□□□□ 0.16
Pkd1O08852 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pkd1O08852 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pkd1O08852 AC167019.3-201ENSMUST00000228225 1266 ntBASIC16.06■□□□□ 0.16
Pkd1O08852 Gm6311-201ENSMUST00000073790 878 ntBASIC16.06■□□□□ 0.16
Pkd1O08852 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC16.06■□□□□ 0.16
Pkd1O08852 Gm6345-201ENSMUST00000180378 1691 ntBASIC16.06■□□□□ 0.16
Pkd1O08852 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC16.05■□□□□ 0.16
Pkd1O08852 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pkd1O08852 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC16.04■□□□□ 0.16
Pkd1O08852 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pkd1O08852 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pkd1O08852 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pkd1O08852 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pkd1O08852 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pkd1O08852 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pkd1O08852 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC16.02■□□□□ 0.16
Pkd1O08852 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Pkd1O08852 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pkd1O08852 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Pkd1O08852 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pkd1O08852 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Pkd1O08852 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pkd1O08852 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pkd1O08852 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC16■□□□□ 0.15
Pkd1O08852 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pkd1O08852 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pkd1O08852 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pkd1O08852 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pkd1O08852 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pkd1O08852 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pkd1O08852 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pkd1O08852 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pkd1O08852 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pkd1O08852 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pkd1O08852 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pkd1O08852 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC15.98■□□□□ 0.15
Pkd1O08852 Gm4799-201ENSMUST00000095396 657 ntBASIC15.97■□□□□ 0.15
Pkd1O08852 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pkd1O08852 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pkd1O08852 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pkd1O08852 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC15.97■□□□□ 0.15
Pkd1O08852 Gm12366-201ENSMUST00000121722 873 ntBASIC15.97■□□□□ 0.15
Pkd1O08852 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC15.97■□□□□ 0.15
Pkd1O08852 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC15.97■□□□□ 0.15
Pkd1O08852 Gm5786-201ENSMUST00000085368 882 ntBASIC15.97■□□□□ 0.15
Pkd1O08852 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pkd1O08852 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pkd1O08852 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC15.96■□□□□ 0.14
Pkd1O08852 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pkd1O08852 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Pkd1O08852 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pkd1O08852 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pkd1O08852 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Pkd1O08852 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Pkd1O08852 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pkd1O08852 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pkd1O08852 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pkd1O08852 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pkd1O08852 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Pkd1O08852 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Pkd1O08852 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pkd1O08852 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pkd1O08852 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 134.8 ms