Protein–RNA interactions for Protein: E9PUB3

Gm5878, Predicted gene 5878, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5878E9PUB3 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gm5878E9PUB3 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC18.32■□□□□ 0.52
Gm5878E9PUB3 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm5878E9PUB3 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm5878E9PUB3 Pcf11-205ENSMUST00000208255 1720 ntBASIC18.3■□□□□ 0.52
Gm5878E9PUB3 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Gm5878E9PUB3 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm5878E9PUB3 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm5878E9PUB3 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm5878E9PUB3 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Gm5878E9PUB3 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Gm5878E9PUB3 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Gm5878E9PUB3 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Gm5878E9PUB3 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Gm5878E9PUB3 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Gm5878E9PUB3 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Gm5878E9PUB3 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Gm5878E9PUB3 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm5878E9PUB3 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Gm5878E9PUB3 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC18.26■□□□□ 0.51
Gm5878E9PUB3 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm5878E9PUB3 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Gm5878E9PUB3 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm5878E9PUB3 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm5878E9PUB3 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm5878E9PUB3 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Gm5878E9PUB3 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Gm5878E9PUB3 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Gm5878E9PUB3 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm5878E9PUB3 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Gm5878E9PUB3 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
Gm5878E9PUB3 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm5878E9PUB3 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Gm5878E9PUB3 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm5878E9PUB3 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC18.2■□□□□ 0.5
Gm5878E9PUB3 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm5878E9PUB3 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm5878E9PUB3 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm5878E9PUB3 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC18.18■□□□□ 0.5
Gm5878E9PUB3 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm5878E9PUB3 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm5878E9PUB3 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm5878E9PUB3 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Gm5878E9PUB3 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Gm5878E9PUB3 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
Gm5878E9PUB3 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Gm5878E9PUB3 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Gm5878E9PUB3 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm5878E9PUB3 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm5878E9PUB3 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm5878E9PUB3 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm5878E9PUB3 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Gm5878E9PUB3 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm5878E9PUB3 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm5878E9PUB3 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Gm5878E9PUB3 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Gm5878E9PUB3 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Gm5878E9PUB3 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Gm5878E9PUB3 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm5878E9PUB3 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm5878E9PUB3 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm5878E9PUB3 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm5878E9PUB3 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Gm5878E9PUB3 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm5878E9PUB3 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm5878E9PUB3 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC18.09■□□□□ 0.49
Gm5878E9PUB3 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm5878E9PUB3 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Gm5878E9PUB3 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Gm5878E9PUB3 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Gm5878E9PUB3 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm5878E9PUB3 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Gm5878E9PUB3 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Gm5878E9PUB3 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm5878E9PUB3 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm5878E9PUB3 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm5878E9PUB3 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Gm5878E9PUB3 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC18.06■□□□□ 0.48
Gm5878E9PUB3 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
Gm5878E9PUB3 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Gm5878E9PUB3 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC18.05■□□□□ 0.48
Gm5878E9PUB3 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm5878E9PUB3 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm5878E9PUB3 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm5878E9PUB3 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm5878E9PUB3 Gm43863-201ENSMUST00000203822 1192 ntBASIC18.04■□□□□ 0.48
Gm5878E9PUB3 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Gm5878E9PUB3 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm5878E9PUB3 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm5878E9PUB3 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Gm5878E9PUB3 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm5878E9PUB3 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm5878E9PUB3 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm5878E9PUB3 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm5878E9PUB3 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm5878E9PUB3 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC18.02■□□□□ 0.48
Gm5878E9PUB3 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm5878E9PUB3 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Gm5878E9PUB3 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm5878E9PUB3 Zfp131-205ENSMUST00000223812 663 ntBASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms