Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 Gm6345-201ENSMUST00000180378 1691 ntBASIC19.7■□□□□ 0.74
Nkx6-2D3Z4R4 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nkx6-2D3Z4R4 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Nkx6-2D3Z4R4 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nkx6-2D3Z4R4 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nkx6-2D3Z4R4 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nkx6-2D3Z4R4 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx6-2D3Z4R4 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx6-2D3Z4R4 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Nkx6-2D3Z4R4 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nkx6-2D3Z4R4 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Nkx6-2D3Z4R4 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.67■□□□□ 0.74
Nkx6-2D3Z4R4 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nkx6-2D3Z4R4 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx6-2D3Z4R4 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx6-2D3Z4R4 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Nkx6-2D3Z4R4 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx6-2D3Z4R4 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.66■□□□□ 0.74
Nkx6-2D3Z4R4 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Nkx6-2D3Z4R4 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nkx6-2D3Z4R4 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC19.65■□□□□ 0.74
Nkx6-2D3Z4R4 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nkx6-2D3Z4R4 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC19.64■□□□□ 0.73
Nkx6-2D3Z4R4 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
Nkx6-2D3Z4R4 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nkx6-2D3Z4R4 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Nkx6-2D3Z4R4 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Nkx6-2D3Z4R4 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nkx6-2D3Z4R4 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
Nkx6-2D3Z4R4 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nkx6-2D3Z4R4 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nkx6-2D3Z4R4 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC19.62■□□□□ 0.73
Nkx6-2D3Z4R4 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Nkx6-2D3Z4R4 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nkx6-2D3Z4R4 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Nkx6-2D3Z4R4 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Nkx6-2D3Z4R4 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Nkx6-2D3Z4R4 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC19.61■□□□□ 0.73
Nkx6-2D3Z4R4 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nkx6-2D3Z4R4 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nkx6-2D3Z4R4 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nkx6-2D3Z4R4 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Nkx6-2D3Z4R4 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nkx6-2D3Z4R4 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nkx6-2D3Z4R4 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Nkx6-2D3Z4R4 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nkx6-2D3Z4R4 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nkx6-2D3Z4R4 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nkx6-2D3Z4R4 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nkx6-2D3Z4R4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nkx6-2D3Z4R4 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Nkx6-2D3Z4R4 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nkx6-2D3Z4R4 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Nkx6-2D3Z4R4 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nkx6-2D3Z4R4 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nkx6-2D3Z4R4 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nkx6-2D3Z4R4 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nkx6-2D3Z4R4 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nkx6-2D3Z4R4 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nkx6-2D3Z4R4 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Nkx6-2D3Z4R4 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.51■□□□□ 0.71
Nkx6-2D3Z4R4 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nkx6-2D3Z4R4 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Nkx6-2D3Z4R4 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nkx6-2D3Z4R4 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nkx6-2D3Z4R4 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nkx6-2D3Z4R4 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Nkx6-2D3Z4R4 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nkx6-2D3Z4R4 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nkx6-2D3Z4R4 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Nkx6-2D3Z4R4 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Nkx6-2D3Z4R4 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nkx6-2D3Z4R4 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Nkx6-2D3Z4R4 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nkx6-2D3Z4R4 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
Nkx6-2D3Z4R4 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nkx6-2D3Z4R4 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nkx6-2D3Z4R4 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
Nkx6-2D3Z4R4 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nkx6-2D3Z4R4 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nkx6-2D3Z4R4 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Nkx6-2D3Z4R4 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.45■□□□□ 0.7
Nkx6-2D3Z4R4 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC19.45■□□□□ 0.7
Nkx6-2D3Z4R4 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Nkx6-2D3Z4R4 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Nkx6-2D3Z4R4 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.43■□□□□ 0.7
Nkx6-2D3Z4R4 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Nkx6-2D3Z4R4 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nkx6-2D3Z4R4 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nkx6-2D3Z4R4 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nkx6-2D3Z4R4 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nkx6-2D3Z4R4 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC19.42■□□□□ 0.7
Nkx6-2D3Z4R4 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nkx6-2D3Z4R4 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nkx6-2D3Z4R4 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nkx6-2D3Z4R4 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nkx6-2D3Z4R4 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nkx6-2D3Z4R4 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nkx6-2D3Z4R4 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nkx6-2D3Z4R4 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms