Protein–RNA interactions for Protein: D3YUM8

Gm4950, Proteasome subunit beta type, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4950D3YUM8 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gm4950D3YUM8 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gm4950D3YUM8 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Gm4950D3YUM8 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gm4950D3YUM8 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gm4950D3YUM8 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gm4950D3YUM8 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Gm4950D3YUM8 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Gm4950D3YUM8 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm4950D3YUM8 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm4950D3YUM8 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Gm4950D3YUM8 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Gm4950D3YUM8 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.59■□□□□ 0.89
Gm4950D3YUM8 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.58■□□□□ 0.89
Gm4950D3YUM8 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.58■□□□□ 0.89
Gm4950D3YUM8 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Gm4950D3YUM8 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Gm4950D3YUM8 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Gm4950D3YUM8 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.57■□□□□ 0.88
Gm4950D3YUM8 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm4950D3YUM8 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm4950D3YUM8 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm4950D3YUM8 Zfp131-205ENSMUST00000223812 663 ntBASIC20.56■□□□□ 0.88
Gm4950D3YUM8 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm4950D3YUM8 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm4950D3YUM8 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm4950D3YUM8 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.53■□□□□ 0.88
Gm4950D3YUM8 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm4950D3YUM8 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20.53■□□□□ 0.88
Gm4950D3YUM8 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gm4950D3YUM8 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.52■□□□□ 0.88
Gm4950D3YUM8 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Gm4950D3YUM8 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gm4950D3YUM8 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gm4950D3YUM8 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Gm4950D3YUM8 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm4950D3YUM8 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm4950D3YUM8 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Gm4950D3YUM8 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm4950D3YUM8 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm4950D3YUM8 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm4950D3YUM8 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm4950D3YUM8 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm4950D3YUM8 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.49■□□□□ 0.87
Gm4950D3YUM8 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm4950D3YUM8 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Gm4950D3YUM8 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.48■□□□□ 0.87
Gm4950D3YUM8 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.48■□□□□ 0.87
Gm4950D3YUM8 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gm4950D3YUM8 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Gm4950D3YUM8 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gm4950D3YUM8 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.46■□□□□ 0.87
Gm4950D3YUM8 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gm4950D3YUM8 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gm4950D3YUM8 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Gm4950D3YUM8 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gm4950D3YUM8 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.87
Gm4950D3YUM8 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.45■□□□□ 0.86
Gm4950D3YUM8 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gm4950D3YUM8 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
Gm4950D3YUM8 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gm4950D3YUM8 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.44■□□□□ 0.86
Gm4950D3YUM8 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Gm4950D3YUM8 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
Gm4950D3YUM8 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gm4950D3YUM8 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Gm4950D3YUM8 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Gm4950D3YUM8 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Gm4950D3YUM8 Gm9397-201ENSMUST00000200125 605 ntBASIC20.42■□□□□ 0.86
Gm4950D3YUM8 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gm4950D3YUM8 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.41■□□□□ 0.86
Gm4950D3YUM8 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Gm4950D3YUM8 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.4■□□□□ 0.86
Gm4950D3YUM8 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC20.4■□□□□ 0.86
Gm4950D3YUM8 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Gm4950D3YUM8 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gm4950D3YUM8 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
Gm4950D3YUM8 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.39■□□□□ 0.85
Gm4950D3YUM8 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gm4950D3YUM8 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Gm4950D3YUM8 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm4950D3YUM8 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Gm4950D3YUM8 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Gm4950D3YUM8 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Gm4950D3YUM8 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.37■□□□□ 0.85
Gm4950D3YUM8 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.37■□□□□ 0.85
Gm4950D3YUM8 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.37■□□□□ 0.85
Gm4950D3YUM8 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Gm4950D3YUM8 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Gm4950D3YUM8 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm4950D3YUM8 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.36■□□□□ 0.85
Gm4950D3YUM8 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm4950D3YUM8 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gm4950D3YUM8 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gm4950D3YUM8 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gm4950D3YUM8 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
Gm4950D3YUM8 Gm24970-201ENSMUST00000175582 82 ntBASIC20.35■□□□□ 0.85
Gm4950D3YUM8 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
Gm4950D3YUM8 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm4950D3YUM8 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms