Protein–RNA interactions for Protein: C0HKE4

Hist1h2ae, Histone H2A type 1-E, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2aeC0HKE4 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Hist1h2aeC0HKE4 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Hist1h2aeC0HKE4 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
Hist1h2aeC0HKE4 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC22.04■■□□□ 1.12
Hist1h2aeC0HKE4 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
Hist1h2aeC0HKE4 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC22.04■■□□□ 1.12
Hist1h2aeC0HKE4 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Hist1h2aeC0HKE4 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Hist1h2aeC0HKE4 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Hist1h2aeC0HKE4 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Hist1h2aeC0HKE4 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Hist1h2aeC0HKE4 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Hist1h2aeC0HKE4 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Hist1h2aeC0HKE4 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Hist1h2aeC0HKE4 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Hist1h2aeC0HKE4 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC22.01■■□□□ 1.11
Hist1h2aeC0HKE4 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Hist1h2aeC0HKE4 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC22■■□□□ 1.11
Hist1h2aeC0HKE4 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Hist1h2aeC0HKE4 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.99■■□□□ 1.11
Hist1h2aeC0HKE4 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Hist1h2aeC0HKE4 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Hist1h2aeC0HKE4 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Hist1h2aeC0HKE4 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Hist1h2aeC0HKE4 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Hist1h2aeC0HKE4 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Hist1h2aeC0HKE4 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
Hist1h2aeC0HKE4 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.95■■□□□ 1.11
Hist1h2aeC0HKE4 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Hist1h2aeC0HKE4 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Hist1h2aeC0HKE4 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Hist1h2aeC0HKE4 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Hist1h2aeC0HKE4 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Hist1h2aeC0HKE4 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Hist1h2aeC0HKE4 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Hist1h2aeC0HKE4 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.93■■□□□ 1.1
Hist1h2aeC0HKE4 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Hist1h2aeC0HKE4 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Hist1h2aeC0HKE4 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Hist1h2aeC0HKE4 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.92■■□□□ 1.1
Hist1h2aeC0HKE4 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Hist1h2aeC0HKE4 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Hist1h2aeC0HKE4 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.91■■□□□ 1.1
Hist1h2aeC0HKE4 Zfp131-205ENSMUST00000223812 663 ntBASIC21.91■■□□□ 1.1
Hist1h2aeC0HKE4 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Hist1h2aeC0HKE4 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Hist1h2aeC0HKE4 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Hist1h2aeC0HKE4 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Hist1h2aeC0HKE4 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Hist1h2aeC0HKE4 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Hist1h2aeC0HKE4 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.88■■□□□ 1.09
Hist1h2aeC0HKE4 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.88■■□□□ 1.09
Hist1h2aeC0HKE4 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Hist1h2aeC0HKE4 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Hist1h2aeC0HKE4 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.87■■□□□ 1.09
Hist1h2aeC0HKE4 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Hist1h2aeC0HKE4 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Hist1h2aeC0HKE4 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.85■■□□□ 1.09
Hist1h2aeC0HKE4 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Hist1h2aeC0HKE4 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Hist1h2aeC0HKE4 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Hist1h2aeC0HKE4 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Hist1h2aeC0HKE4 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Hist1h2aeC0HKE4 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Hist1h2aeC0HKE4 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.82■■□□□ 1.08
Hist1h2aeC0HKE4 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
Hist1h2aeC0HKE4 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Hist1h2aeC0HKE4 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Hist1h2aeC0HKE4 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Hist1h2aeC0HKE4 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Hist1h2aeC0HKE4 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Hist1h2aeC0HKE4 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Hist1h2aeC0HKE4 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Hist1h2aeC0HKE4 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Hist1h2aeC0HKE4 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Hist1h2aeC0HKE4 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Hist1h2aeC0HKE4 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Hist1h2aeC0HKE4 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Hist1h2aeC0HKE4 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.79■■□□□ 1.08
Hist1h2aeC0HKE4 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Hist1h2aeC0HKE4 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Hist1h2aeC0HKE4 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Hist1h2aeC0HKE4 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.78■■□□□ 1.08
Hist1h2aeC0HKE4 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21.78■■□□□ 1.08
Hist1h2aeC0HKE4 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Hist1h2aeC0HKE4 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Hist1h2aeC0HKE4 Gm9397-201ENSMUST00000200125 605 ntBASIC21.77■■□□□ 1.08
Hist1h2aeC0HKE4 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Hist1h2aeC0HKE4 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Hist1h2aeC0HKE4 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.76■■□□□ 1.07
Hist1h2aeC0HKE4 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
Hist1h2aeC0HKE4 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.76■■□□□ 1.07
Hist1h2aeC0HKE4 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.76■■□□□ 1.07
Hist1h2aeC0HKE4 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Hist1h2aeC0HKE4 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Hist1h2aeC0HKE4 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Hist1h2aeC0HKE4 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.75■■□□□ 1.07
Hist1h2aeC0HKE4 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Hist1h2aeC0HKE4 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Hist1h2aeC0HKE4 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms