Protein–RNA interactions for Protein: B9EKX1

Ptchd4, Patched domain-containing protein 4, mousemouse

Predictions only

Length 904 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd4B9EKX1 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Ptchd4B9EKX1 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Ptchd4B9EKX1 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Ptchd4B9EKX1 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Ptchd4B9EKX1 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Ptchd4B9EKX1 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Ptchd4B9EKX1 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Ptchd4B9EKX1 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Ptchd4B9EKX1 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Ptchd4B9EKX1 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC26.67■■□□□ 1.86
Ptchd4B9EKX1 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC26.67■■□□□ 1.86
Ptchd4B9EKX1 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Ptchd4B9EKX1 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC26.66■■□□□ 1.86
Ptchd4B9EKX1 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC26.66■■□□□ 1.86
Ptchd4B9EKX1 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Ptchd4B9EKX1 Gm7432-201ENSMUST00000210343 879 ntBASIC26.64■■□□□ 1.86
Ptchd4B9EKX1 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC26.64■■□□□ 1.85
Ptchd4B9EKX1 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
Ptchd4B9EKX1 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC26.62■■□□□ 1.85
Ptchd4B9EKX1 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
Ptchd4B9EKX1 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Ptchd4B9EKX1 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
Ptchd4B9EKX1 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Ptchd4B9EKX1 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
Ptchd4B9EKX1 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Ptchd4B9EKX1 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.84
Ptchd4B9EKX1 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Ptchd4B9EKX1 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC26.57■■□□□ 1.84
Ptchd4B9EKX1 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC26.57■■□□□ 1.84
Ptchd4B9EKX1 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Ptchd4B9EKX1 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Ptchd4B9EKX1 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC26.54■■□□□ 1.84
Ptchd4B9EKX1 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
Ptchd4B9EKX1 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Ptchd4B9EKX1 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Ptchd4B9EKX1 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC26.53■■□□□ 1.84
Ptchd4B9EKX1 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Ptchd4B9EKX1 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC26.51■■□□□ 1.83
Ptchd4B9EKX1 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ptchd4B9EKX1 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC26.5■■□□□ 1.83
Ptchd4B9EKX1 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC26.5■■□□□ 1.83
Ptchd4B9EKX1 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Ptchd4B9EKX1 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ptchd4B9EKX1 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ptchd4B9EKX1 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Ptchd4B9EKX1 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Ptchd4B9EKX1 Gm11599-201ENSMUST00000118720 878 ntBASIC26.47■■□□□ 1.83
Ptchd4B9EKX1 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC26.47■■□□□ 1.83
Ptchd4B9EKX1 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
Ptchd4B9EKX1 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Ptchd4B9EKX1 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC26.46■■□□□ 1.83
Ptchd4B9EKX1 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC26.44■■□□□ 1.82
Ptchd4B9EKX1 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC26.44■■□□□ 1.82
Ptchd4B9EKX1 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Ptchd4B9EKX1 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
Ptchd4B9EKX1 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Ptchd4B9EKX1 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC26.42■■□□□ 1.82
Ptchd4B9EKX1 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
Ptchd4B9EKX1 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC26.42■■□□□ 1.82
Ptchd4B9EKX1 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Ptchd4B9EKX1 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC26.41■■□□□ 1.82
Ptchd4B9EKX1 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC26.41■■□□□ 1.82
Ptchd4B9EKX1 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Ptchd4B9EKX1 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC26.41■■□□□ 1.82
Ptchd4B9EKX1 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
Ptchd4B9EKX1 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Ptchd4B9EKX1 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Ptchd4B9EKX1 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC26.4■■□□□ 1.82
Ptchd4B9EKX1 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
Ptchd4B9EKX1 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.82
Ptchd4B9EKX1 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC26.39■■□□□ 1.82
Ptchd4B9EKX1 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Ptchd4B9EKX1 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC26.39■■□□□ 1.82
Ptchd4B9EKX1 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
Ptchd4B9EKX1 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Ptchd4B9EKX1 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC26.38■■□□□ 1.81
Ptchd4B9EKX1 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Ptchd4B9EKX1 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Ptchd4B9EKX1 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Ptchd4B9EKX1 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC26.35■■□□□ 1.81
Ptchd4B9EKX1 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Ptchd4B9EKX1 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Ptchd4B9EKX1 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Ptchd4B9EKX1 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC26.33■■□□□ 1.81
Ptchd4B9EKX1 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Ptchd4B9EKX1 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
Ptchd4B9EKX1 Gm30023-201ENSMUST00000197970 889 ntBASIC26.32■■□□□ 1.8
Ptchd4B9EKX1 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Ptchd4B9EKX1 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
Ptchd4B9EKX1 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ptchd4B9EKX1 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Ptchd4B9EKX1 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Ptchd4B9EKX1 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Ptchd4B9EKX1 Pcf11-205ENSMUST00000208255 1720 ntBASIC26.28■■□□□ 1.8
Ptchd4B9EKX1 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Ptchd4B9EKX1 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Ptchd4B9EKX1 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Ptchd4B9EKX1 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Ptchd4B9EKX1 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Ptchd4B9EKX1 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms