Protein–RNA interactions for Protein: A0A1L1SQF0

Uncharacterized protein (Fragment), mousemouse

Predictions only

Length 893 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1L1SQF0 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
A0A1L1SQF0 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
A0A1L1SQF0 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
A0A1L1SQF0 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
A0A1L1SQF0 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
A0A1L1SQF0 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC27.26■■□□□ 1.95
A0A1L1SQF0 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
A0A1L1SQF0 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC27.26■■□□□ 1.95
A0A1L1SQF0 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
A0A1L1SQF0 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
A0A1L1SQF0 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
A0A1L1SQF0 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
A0A1L1SQF0 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC27.24■■□□□ 1.95
A0A1L1SQF0 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
A0A1L1SQF0 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
A0A1L1SQF0 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
A0A1L1SQF0 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
A0A1L1SQF0 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC27.22■■□□□ 1.95
A0A1L1SQF0 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC27.21■■□□□ 1.95
A0A1L1SQF0 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.95
A0A1L1SQF0 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
A0A1L1SQF0 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
A0A1L1SQF0 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC27.19■■□□□ 1.94
A0A1L1SQF0 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
A0A1L1SQF0 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC27.17■■□□□ 1.94
A0A1L1SQF0 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
A0A1L1SQF0 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC27.17■■□□□ 1.94
A0A1L1SQF0 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
A0A1L1SQF0 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC27.16■■□□□ 1.94
A0A1L1SQF0 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
A0A1L1SQF0 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
A0A1L1SQF0 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC27.15■■□□□ 1.94
A0A1L1SQF0 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
A0A1L1SQF0 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
A0A1L1SQF0 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
A0A1L1SQF0 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
A0A1L1SQF0 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
A0A1L1SQF0 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
A0A1L1SQF0 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC27.11■■□□□ 1.93
A0A1L1SQF0 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC27.11■■□□□ 1.93
A0A1L1SQF0 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
A0A1L1SQF0 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
A0A1L1SQF0 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC27.1■■□□□ 1.93
A0A1L1SQF0 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
A0A1L1SQF0 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
A0A1L1SQF0 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
A0A1L1SQF0 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
A0A1L1SQF0 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
A0A1L1SQF0 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
A0A1L1SQF0 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
A0A1L1SQF0 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC27.07■■□□□ 1.92
A0A1L1SQF0 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
A0A1L1SQF0 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
A0A1L1SQF0 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC27.07■■□□□ 1.92
A0A1L1SQF0 Pcf11-205ENSMUST00000208255 1720 ntBASIC27.06■■□□□ 1.92
A0A1L1SQF0 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
A0A1L1SQF0 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
A0A1L1SQF0 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC27.03■■□□□ 1.92
A0A1L1SQF0 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC27.03■■□□□ 1.92
A0A1L1SQF0 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
A0A1L1SQF0 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
A0A1L1SQF0 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC27.02■■□□□ 1.92
A0A1L1SQF0 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC27.01■■□□□ 1.91
A0A1L1SQF0 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
A0A1L1SQF0 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC27■■□□□ 1.91
A0A1L1SQF0 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
A0A1L1SQF0 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
A0A1L1SQF0 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
A0A1L1SQF0 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
A0A1L1SQF0 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
A0A1L1SQF0 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC26.95■■□□□ 1.91
A0A1L1SQF0 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC26.95■■□□□ 1.9
A0A1L1SQF0 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
A0A1L1SQF0 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC26.94■■□□□ 1.9
A0A1L1SQF0 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC26.93■■□□□ 1.9
A0A1L1SQF0 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC26.92■■□□□ 1.9
A0A1L1SQF0 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
A0A1L1SQF0 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
A0A1L1SQF0 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
A0A1L1SQF0 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
A0A1L1SQF0 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
A0A1L1SQF0 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC26.9■■□□□ 1.9
A0A1L1SQF0 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
A0A1L1SQF0 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC26.9■■□□□ 1.9
A0A1L1SQF0 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
A0A1L1SQF0 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC26.89■■□□□ 1.89
A0A1L1SQF0 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
A0A1L1SQF0 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
A0A1L1SQF0 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
A0A1L1SQF0 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
A0A1L1SQF0 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
A0A1L1SQF0 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC26.86■■□□□ 1.89
A0A1L1SQF0 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
A0A1L1SQF0 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
A0A1L1SQF0 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
A0A1L1SQF0 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC26.85■■□□□ 1.89
A0A1L1SQF0 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
A0A1L1SQF0 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC26.85■■□□□ 1.89
A0A1L1SQF0 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
A0A1L1SQF0 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC26.84■■□□□ 1.89
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms