Protein–RNA interactions for Protein: A0A1L1SQF0

Uncharacterized protein (Fragment), mousemouse

Predictions only

Length 893 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1L1SQF0 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
A0A1L1SQF0 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
A0A1L1SQF0 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
A0A1L1SQF0 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
A0A1L1SQF0 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
A0A1L1SQF0 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC27.26■■□□□ 1.95
A0A1L1SQF0 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
A0A1L1SQF0 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC27.26■■□□□ 1.95
A0A1L1SQF0 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
A0A1L1SQF0 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
A0A1L1SQF0 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
A0A1L1SQF0 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
A0A1L1SQF0 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC27.24■■□□□ 1.95
A0A1L1SQF0 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
A0A1L1SQF0 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
A0A1L1SQF0 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
A0A1L1SQF0 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
A0A1L1SQF0 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC27.22■■□□□ 1.95
A0A1L1SQF0 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC27.21■■□□□ 1.95
A0A1L1SQF0 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.95
A0A1L1SQF0 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
A0A1L1SQF0 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
A0A1L1SQF0 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC27.19■■□□□ 1.94
A0A1L1SQF0 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
A0A1L1SQF0 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC27.17■■□□□ 1.94
A0A1L1SQF0 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
A0A1L1SQF0 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC27.17■■□□□ 1.94
A0A1L1SQF0 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
A0A1L1SQF0 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC27.16■■□□□ 1.94
A0A1L1SQF0 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
A0A1L1SQF0 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
A0A1L1SQF0 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC27.15■■□□□ 1.94
A0A1L1SQF0 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
A0A1L1SQF0 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
A0A1L1SQF0 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
A0A1L1SQF0 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
A0A1L1SQF0 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
A0A1L1SQF0 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
A0A1L1SQF0 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC27.11■■□□□ 1.93
A0A1L1SQF0 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC27.11■■□□□ 1.93
A0A1L1SQF0 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
A0A1L1SQF0 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
A0A1L1SQF0 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC27.1■■□□□ 1.93
A0A1L1SQF0 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
A0A1L1SQF0 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
A0A1L1SQF0 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
A0A1L1SQF0 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
A0A1L1SQF0 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
A0A1L1SQF0 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
A0A1L1SQF0 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
A0A1L1SQF0 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC27.07■■□□□ 1.92
A0A1L1SQF0 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
A0A1L1SQF0 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
A0A1L1SQF0 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC27.07■■□□□ 1.92
A0A1L1SQF0 Pcf11-205ENSMUST00000208255 1720 ntBASIC27.06■■□□□ 1.92
A0A1L1SQF0 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
A0A1L1SQF0 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
A0A1L1SQF0 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC27.03■■□□□ 1.92
A0A1L1SQF0 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC27.03■■□□□ 1.92
A0A1L1SQF0 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
A0A1L1SQF0 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
A0A1L1SQF0 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC27.02■■□□□ 1.92
A0A1L1SQF0 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC27.01■■□□□ 1.91
A0A1L1SQF0 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
A0A1L1SQF0 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC27■■□□□ 1.91
A0A1L1SQF0 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
A0A1L1SQF0 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
A0A1L1SQF0 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
A0A1L1SQF0 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
A0A1L1SQF0 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
A0A1L1SQF0 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC26.95■■□□□ 1.91
A0A1L1SQF0 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC26.95■■□□□ 1.9
A0A1L1SQF0 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
A0A1L1SQF0 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC26.94■■□□□ 1.9
A0A1L1SQF0 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC26.93■■□□□ 1.9
A0A1L1SQF0 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC26.92■■□□□ 1.9
A0A1L1SQF0 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
A0A1L1SQF0 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
A0A1L1SQF0 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
A0A1L1SQF0 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
A0A1L1SQF0 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
A0A1L1SQF0 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC26.9■■□□□ 1.9
A0A1L1SQF0 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
A0A1L1SQF0 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC26.9■■□□□ 1.9
A0A1L1SQF0 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
A0A1L1SQF0 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC26.89■■□□□ 1.89
A0A1L1SQF0 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
A0A1L1SQF0 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
A0A1L1SQF0 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
A0A1L1SQF0 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
A0A1L1SQF0 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
A0A1L1SQF0 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC26.86■■□□□ 1.89
A0A1L1SQF0 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
A0A1L1SQF0 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
A0A1L1SQF0 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
A0A1L1SQF0 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC26.85■■□□□ 1.89
A0A1L1SQF0 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
A0A1L1SQF0 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC26.85■■□□□ 1.89
A0A1L1SQF0 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
A0A1L1SQF0 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC26.84■■□□□ 1.89
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms