Protein–RNA interactions for Protein: A0A1B0GSM6

Gm13539, Predicted gene 13539, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm13539A0A1B0GSM6 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Gm13539A0A1B0GSM6 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Gm13539A0A1B0GSM6 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC22.56■■□□□ 1.2
Gm13539A0A1B0GSM6 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Gm13539A0A1B0GSM6 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Gm13539A0A1B0GSM6 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Gm13539A0A1B0GSM6 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Gm13539A0A1B0GSM6 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Gm13539A0A1B0GSM6 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC22.54■■□□□ 1.2
Gm13539A0A1B0GSM6 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Gm13539A0A1B0GSM6 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Gm13539A0A1B0GSM6 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
Gm13539A0A1B0GSM6 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Gm13539A0A1B0GSM6 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Gm13539A0A1B0GSM6 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Gm13539A0A1B0GSM6 Pcf11-205ENSMUST00000208255 1720 ntBASIC22.51■■□□□ 1.19
Gm13539A0A1B0GSM6 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Gm13539A0A1B0GSM6 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Gm13539A0A1B0GSM6 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Gm13539A0A1B0GSM6 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Gm13539A0A1B0GSM6 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Gm13539A0A1B0GSM6 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC22.48■■□□□ 1.19
Gm13539A0A1B0GSM6 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Gm13539A0A1B0GSM6 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Gm13539A0A1B0GSM6 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Gm13539A0A1B0GSM6 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Gm13539A0A1B0GSM6 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Gm13539A0A1B0GSM6 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Gm13539A0A1B0GSM6 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Gm13539A0A1B0GSM6 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
Gm13539A0A1B0GSM6 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Gm13539A0A1B0GSM6 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Gm13539A0A1B0GSM6 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Gm13539A0A1B0GSM6 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.18
Gm13539A0A1B0GSM6 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
Gm13539A0A1B0GSM6 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC22.38■■□□□ 1.17
Gm13539A0A1B0GSM6 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
Gm13539A0A1B0GSM6 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Gm13539A0A1B0GSM6 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Gm13539A0A1B0GSM6 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Gm13539A0A1B0GSM6 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Gm13539A0A1B0GSM6 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Gm13539A0A1B0GSM6 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Gm13539A0A1B0GSM6 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC22.34■■□□□ 1.17
Gm13539A0A1B0GSM6 Zfp131-205ENSMUST00000223812 663 ntBASIC22.34■■□□□ 1.17
Gm13539A0A1B0GSM6 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Gm13539A0A1B0GSM6 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
Gm13539A0A1B0GSM6 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Gm13539A0A1B0GSM6 Gm43863-201ENSMUST00000203822 1192 ntBASIC22.33■■□□□ 1.17
Gm13539A0A1B0GSM6 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Gm13539A0A1B0GSM6 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC22.33■■□□□ 1.16
Gm13539A0A1B0GSM6 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Gm13539A0A1B0GSM6 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Gm13539A0A1B0GSM6 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Gm13539A0A1B0GSM6 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Gm13539A0A1B0GSM6 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Gm13539A0A1B0GSM6 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC22.31■■□□□ 1.16
Gm13539A0A1B0GSM6 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC22.31■■□□□ 1.16
Gm13539A0A1B0GSM6 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Gm13539A0A1B0GSM6 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.31■■□□□ 1.16
Gm13539A0A1B0GSM6 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Gm13539A0A1B0GSM6 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Gm13539A0A1B0GSM6 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
Gm13539A0A1B0GSM6 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Gm13539A0A1B0GSM6 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Gm13539A0A1B0GSM6 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Gm13539A0A1B0GSM6 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Gm13539A0A1B0GSM6 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Gm13539A0A1B0GSM6 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC22.27■■□□□ 1.16
Gm13539A0A1B0GSM6 AC157572.2-201ENSMUST00000226970 908 ntBASIC22.26■■□□□ 1.15
Gm13539A0A1B0GSM6 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
Gm13539A0A1B0GSM6 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Gm13539A0A1B0GSM6 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Gm13539A0A1B0GSM6 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC22.25■■□□□ 1.15
Gm13539A0A1B0GSM6 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC22.24■■□□□ 1.15
Gm13539A0A1B0GSM6 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
Gm13539A0A1B0GSM6 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC22.23■■□□□ 1.15
Gm13539A0A1B0GSM6 Gm9397-201ENSMUST00000200125 605 ntBASIC22.23■■□□□ 1.15
Gm13539A0A1B0GSM6 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Gm13539A0A1B0GSM6 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Gm13539A0A1B0GSM6 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Gm13539A0A1B0GSM6 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Gm13539A0A1B0GSM6 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Gm13539A0A1B0GSM6 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.21■■□□□ 1.15
Gm13539A0A1B0GSM6 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Gm13539A0A1B0GSM6 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Gm13539A0A1B0GSM6 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Gm13539A0A1B0GSM6 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC22.2■■□□□ 1.14
Gm13539A0A1B0GSM6 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC22.19■■□□□ 1.14
Gm13539A0A1B0GSM6 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Gm13539A0A1B0GSM6 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Gm13539A0A1B0GSM6 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Gm13539A0A1B0GSM6 Gm24970-201ENSMUST00000175582 82 ntBASIC22.18■■□□□ 1.14
Gm13539A0A1B0GSM6 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC22.17■■□□□ 1.14
Gm13539A0A1B0GSM6 Tdp2-203ENSMUST00000223804 1136 ntBASIC22.17■■□□□ 1.14
Gm13539A0A1B0GSM6 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Gm13539A0A1B0GSM6 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Gm13539A0A1B0GSM6 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Gm13539A0A1B0GSM6 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Gm13539A0A1B0GSM6 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms