Protein–RNA interactions for Protein: A0A140T8V5

Pcna-ps2, Proliferating cell nuclear antigen, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcna-ps2A0A140T8V5 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Pcna-ps2A0A140T8V5 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Pcna-ps2A0A140T8V5 Gm45855-201ENSMUST00000212546 880 ntBASIC24.25■■□□□ 1.47
Pcna-ps2A0A140T8V5 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Pcna-ps2A0A140T8V5 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Pcna-ps2A0A140T8V5 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Pcna-ps2A0A140T8V5 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Pcna-ps2A0A140T8V5 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC24.23■■□□□ 1.47
Pcna-ps2A0A140T8V5 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Pcna-ps2A0A140T8V5 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
Pcna-ps2A0A140T8V5 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Pcna-ps2A0A140T8V5 Gm9397-201ENSMUST00000200125 605 ntBASIC24.22■■□□□ 1.47
Pcna-ps2A0A140T8V5 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC24.21■■□□□ 1.47
Pcna-ps2A0A140T8V5 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC24.21■■□□□ 1.47
Pcna-ps2A0A140T8V5 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
Pcna-ps2A0A140T8V5 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Pcna-ps2A0A140T8V5 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
Pcna-ps2A0A140T8V5 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Pcna-ps2A0A140T8V5 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Pcna-ps2A0A140T8V5 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Pcna-ps2A0A140T8V5 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Pcna-ps2A0A140T8V5 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Pcna-ps2A0A140T8V5 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Pcna-ps2A0A140T8V5 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Pcna-ps2A0A140T8V5 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
Pcna-ps2A0A140T8V5 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Pcna-ps2A0A140T8V5 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Pcna-ps2A0A140T8V5 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.46
Pcna-ps2A0A140T8V5 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC24.14■■□□□ 1.46
Pcna-ps2A0A140T8V5 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC24.14■■□□□ 1.46
Pcna-ps2A0A140T8V5 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Pcna-ps2A0A140T8V5 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Pcna-ps2A0A140T8V5 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Pcna-ps2A0A140T8V5 Gm43863-201ENSMUST00000203822 1192 ntBASIC24.12■■□□□ 1.45
Pcna-ps2A0A140T8V5 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC24.12■■□□□ 1.45
Pcna-ps2A0A140T8V5 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC24.11■■□□□ 1.45
Pcna-ps2A0A140T8V5 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Pcna-ps2A0A140T8V5 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Pcna-ps2A0A140T8V5 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC24.1■■□□□ 1.45
Pcna-ps2A0A140T8V5 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Pcna-ps2A0A140T8V5 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Pcna-ps2A0A140T8V5 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Pcna-ps2A0A140T8V5 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
Pcna-ps2A0A140T8V5 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Pcna-ps2A0A140T8V5 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Pcna-ps2A0A140T8V5 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Pcna-ps2A0A140T8V5 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Pcna-ps2A0A140T8V5 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Pcna-ps2A0A140T8V5 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
Pcna-ps2A0A140T8V5 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Pcna-ps2A0A140T8V5 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Pcna-ps2A0A140T8V5 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Pcna-ps2A0A140T8V5 Gm24970-201ENSMUST00000175582 82 ntBASIC24.05■■□□□ 1.44
Pcna-ps2A0A140T8V5 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Pcna-ps2A0A140T8V5 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
Pcna-ps2A0A140T8V5 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Pcna-ps2A0A140T8V5 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Pcna-ps2A0A140T8V5 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Pcna-ps2A0A140T8V5 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Pcna-ps2A0A140T8V5 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC24.02■■□□□ 1.44
Pcna-ps2A0A140T8V5 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Pcna-ps2A0A140T8V5 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC24.02■■□□□ 1.44
Pcna-ps2A0A140T8V5 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Pcna-ps2A0A140T8V5 AC153890.1-201ENSMUST00000220021 2469 ntBASIC24.02■■□□□ 1.44
Pcna-ps2A0A140T8V5 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
Pcna-ps2A0A140T8V5 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Pcna-ps2A0A140T8V5 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC24.01■■□□□ 1.43
Pcna-ps2A0A140T8V5 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
Pcna-ps2A0A140T8V5 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC24■■□□□ 1.43
Pcna-ps2A0A140T8V5 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC24■■□□□ 1.43
Pcna-ps2A0A140T8V5 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC24■■□□□ 1.43
Pcna-ps2A0A140T8V5 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Pcna-ps2A0A140T8V5 AC157572.2-201ENSMUST00000226970 908 ntBASIC23.99■■□□□ 1.43
Pcna-ps2A0A140T8V5 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Pcna-ps2A0A140T8V5 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC23.98■■□□□ 1.43
Pcna-ps2A0A140T8V5 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC23.98■■□□□ 1.43
Pcna-ps2A0A140T8V5 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
Pcna-ps2A0A140T8V5 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC23.97■■□□□ 1.43
Pcna-ps2A0A140T8V5 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Pcna-ps2A0A140T8V5 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Pcna-ps2A0A140T8V5 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Pcna-ps2A0A140T8V5 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC23.95■■□□□ 1.42
Pcna-ps2A0A140T8V5 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Pcna-ps2A0A140T8V5 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC23.94■■□□□ 1.42
Pcna-ps2A0A140T8V5 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
Pcna-ps2A0A140T8V5 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Pcna-ps2A0A140T8V5 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Pcna-ps2A0A140T8V5 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Pcna-ps2A0A140T8V5 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC23.91■■□□□ 1.42
Pcna-ps2A0A140T8V5 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Pcna-ps2A0A140T8V5 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Pcna-ps2A0A140T8V5 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pcna-ps2A0A140T8V5 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.42
Pcna-ps2A0A140T8V5 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Pcna-ps2A0A140T8V5 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Pcna-ps2A0A140T8V5 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Pcna-ps2A0A140T8V5 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Pcna-ps2A0A140T8V5 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
Pcna-ps2A0A140T8V5 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Pcna-ps2A0A140T8V5 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms