Protein–RNA interactions for Protein: A0A140T8M6

Igkv3-5, Immunoglobulin kappa chain variable 3-5 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-5A0A140T8M6 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Igkv3-5A0A140T8M6 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Igkv3-5A0A140T8M6 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Igkv3-5A0A140T8M6 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Igkv3-5A0A140T8M6 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Igkv3-5A0A140T8M6 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Igkv3-5A0A140T8M6 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Igkv3-5A0A140T8M6 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Igkv3-5A0A140T8M6 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC15.22■□□□□ 0.03
Igkv3-5A0A140T8M6 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Igkv3-5A0A140T8M6 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Igkv3-5A0A140T8M6 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Igkv3-5A0A140T8M6 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Igkv3-5A0A140T8M6 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC15.21■□□□□ 0.02
Igkv3-5A0A140T8M6 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Igkv3-5A0A140T8M6 Gm30346-201ENSMUST00000218641 1699 ntBASIC15.19■□□□□ 0.02
Igkv3-5A0A140T8M6 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Igkv3-5A0A140T8M6 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Igkv3-5A0A140T8M6 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Igkv3-5A0A140T8M6 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Igkv3-5A0A140T8M6 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Igkv3-5A0A140T8M6 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Igkv3-5A0A140T8M6 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Igkv3-5A0A140T8M6 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Igkv3-5A0A140T8M6 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Igkv3-5A0A140T8M6 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Igkv3-5A0A140T8M6 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Igkv3-5A0A140T8M6 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Igkv3-5A0A140T8M6 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Igkv3-5A0A140T8M6 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Igkv3-5A0A140T8M6 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Igkv3-5A0A140T8M6 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Igkv3-5A0A140T8M6 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Igkv3-5A0A140T8M6 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Igkv3-5A0A140T8M6 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Igkv3-5A0A140T8M6 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
Igkv3-5A0A140T8M6 Gm24804-201ENSMUST00000174982 85 ntBASIC15.15■□□□□ 0.02
Igkv3-5A0A140T8M6 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Igkv3-5A0A140T8M6 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Igkv3-5A0A140T8M6 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Igkv3-5A0A140T8M6 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Igkv3-5A0A140T8M6 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC15.14■□□□□ 0.01
Igkv3-5A0A140T8M6 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Igkv3-5A0A140T8M6 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Igkv3-5A0A140T8M6 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Igkv3-5A0A140T8M6 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Igkv3-5A0A140T8M6 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC15.14■□□□□ 0.01
Igkv3-5A0A140T8M6 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Igkv3-5A0A140T8M6 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Igkv3-5A0A140T8M6 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Igkv3-5A0A140T8M6 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC15.13■□□□□ 0.01
Igkv3-5A0A140T8M6 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Igkv3-5A0A140T8M6 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
Igkv3-5A0A140T8M6 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Igkv3-5A0A140T8M6 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Igkv3-5A0A140T8M6 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Igkv3-5A0A140T8M6 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Igkv3-5A0A140T8M6 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Igkv3-5A0A140T8M6 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Igkv3-5A0A140T8M6 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Igkv3-5A0A140T8M6 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Igkv3-5A0A140T8M6 Gm16148-201ENSMUST00000119653 893 ntBASIC15.11■□□□□ 0.01
Igkv3-5A0A140T8M6 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Igkv3-5A0A140T8M6 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Igkv3-5A0A140T8M6 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Igkv3-5A0A140T8M6 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Igkv3-5A0A140T8M6 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC15.1■□□□□ 0.01
Igkv3-5A0A140T8M6 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Igkv3-5A0A140T8M6 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC15.1■□□□□ 0.01
Igkv3-5A0A140T8M6 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Igkv3-5A0A140T8M6 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC15.09■□□□□ 0.01
Igkv3-5A0A140T8M6 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Igkv3-5A0A140T8M6 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Igkv3-5A0A140T8M6 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
Igkv3-5A0A140T8M6 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Igkv3-5A0A140T8M6 Amer2-203ENSMUST00000225247 2662 ntBASIC15.08■□□□□ 0
Igkv3-5A0A140T8M6 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC15.07■□□□□ 0
Igkv3-5A0A140T8M6 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Igkv3-5A0A140T8M6 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC15.07■□□□□ 0
Igkv3-5A0A140T8M6 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Igkv3-5A0A140T8M6 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC15.07■□□□□ 0
Igkv3-5A0A140T8M6 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Igkv3-5A0A140T8M6 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC15.06■□□□□ 0
Igkv3-5A0A140T8M6 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Igkv3-5A0A140T8M6 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Igkv3-5A0A140T8M6 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Igkv3-5A0A140T8M6 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC15.04■□□□□ -0
Igkv3-5A0A140T8M6 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Igkv3-5A0A140T8M6 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Igkv3-5A0A140T8M6 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC15.03■□□□□ -0
Igkv3-5A0A140T8M6 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Igkv3-5A0A140T8M6 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC15.02■□□□□ -0
Igkv3-5A0A140T8M6 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Igkv3-5A0A140T8M6 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Igkv3-5A0A140T8M6 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Igkv3-5A0A140T8M6 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Igkv3-5A0A140T8M6 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Igkv3-5A0A140T8M6 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Igkv3-5A0A140T8M6 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Igkv3-5A0A140T8M6 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms