Protein–RNA interactions for Protein: A0A0G2JG17

Trav23, T cell receptor alpha variable 23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav23A0A0G2JG17 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trav23A0A0G2JG17 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trav23A0A0G2JG17 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trav23A0A0G2JG17 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trav23A0A0G2JG17 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trav23A0A0G2JG17 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Trav23A0A0G2JG17 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trav23A0A0G2JG17 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trav23A0A0G2JG17 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trav23A0A0G2JG17 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trav23A0A0G2JG17 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trav23A0A0G2JG17 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.64■□□□□ 0.73
Trav23A0A0G2JG17 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
Trav23A0A0G2JG17 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trav23A0A0G2JG17 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Trav23A0A0G2JG17 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav23A0A0G2JG17 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav23A0A0G2JG17 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav23A0A0G2JG17 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trav23A0A0G2JG17 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trav23A0A0G2JG17 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC19.61■□□□□ 0.73
Trav23A0A0G2JG17 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trav23A0A0G2JG17 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trav23A0A0G2JG17 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Trav23A0A0G2JG17 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trav23A0A0G2JG17 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trav23A0A0G2JG17 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.59■□□□□ 0.73
Trav23A0A0G2JG17 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trav23A0A0G2JG17 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.59■□□□□ 0.73
Trav23A0A0G2JG17 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trav23A0A0G2JG17 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC19.58■□□□□ 0.72
Trav23A0A0G2JG17 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.57■□□□□ 0.72
Trav23A0A0G2JG17 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav23A0A0G2JG17 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trav23A0A0G2JG17 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.55■□□□□ 0.72
Trav23A0A0G2JG17 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trav23A0A0G2JG17 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Trav23A0A0G2JG17 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trav23A0A0G2JG17 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav23A0A0G2JG17 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav23A0A0G2JG17 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trav23A0A0G2JG17 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav23A0A0G2JG17 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav23A0A0G2JG17 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trav23A0A0G2JG17 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trav23A0A0G2JG17 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trav23A0A0G2JG17 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trav23A0A0G2JG17 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trav23A0A0G2JG17 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.52■□□□□ 0.71
Trav23A0A0G2JG17 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav23A0A0G2JG17 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Trav23A0A0G2JG17 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav23A0A0G2JG17 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trav23A0A0G2JG17 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.49■□□□□ 0.71
Trav23A0A0G2JG17 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trav23A0A0G2JG17 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Trav23A0A0G2JG17 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trav23A0A0G2JG17 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trav23A0A0G2JG17 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav23A0A0G2JG17 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trav23A0A0G2JG17 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav23A0A0G2JG17 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.48■□□□□ 0.71
Trav23A0A0G2JG17 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC19.48■□□□□ 0.71
Trav23A0A0G2JG17 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trav23A0A0G2JG17 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC19.48■□□□□ 0.71
Trav23A0A0G2JG17 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav23A0A0G2JG17 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav23A0A0G2JG17 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav23A0A0G2JG17 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav23A0A0G2JG17 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav23A0A0G2JG17 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav23A0A0G2JG17 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trav23A0A0G2JG17 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav23A0A0G2JG17 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav23A0A0G2JG17 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav23A0A0G2JG17 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC19.45■□□□□ 0.7
Trav23A0A0G2JG17 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trav23A0A0G2JG17 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trav23A0A0G2JG17 Gm43445-201ENSMUST00000198564 2091 ntBASIC19.44■□□□□ 0.7
Trav23A0A0G2JG17 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.43■□□□□ 0.7
Trav23A0A0G2JG17 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Trav23A0A0G2JG17 Gm6821-201ENSMUST00000107540 542 ntBASIC19.41■□□□□ 0.7
Trav23A0A0G2JG17 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Trav23A0A0G2JG17 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav23A0A0G2JG17 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav23A0A0G2JG17 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
Trav23A0A0G2JG17 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav23A0A0G2JG17 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav23A0A0G2JG17 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav23A0A0G2JG17 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav23A0A0G2JG17 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Trav23A0A0G2JG17 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trav23A0A0G2JG17 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav23A0A0G2JG17 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trav23A0A0G2JG17 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trav23A0A0G2JG17 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trav23A0A0G2JG17 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trav23A0A0G2JG17 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trav23A0A0G2JG17 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav23A0A0G2JG17 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms