Protein–RNA interactions for Protein: A0A0G2JF94

Trav14-1, T cell receptor alpha variable 14-1 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14-1A0A0G2JF94 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav14-1A0A0G2JF94 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav14-1A0A0G2JF94 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav14-1A0A0G2JF94 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav14-1A0A0G2JF94 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav14-1A0A0G2JF94 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav14-1A0A0G2JF94 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav14-1A0A0G2JF94 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav14-1A0A0G2JF94 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC15.92■□□□□ 0.14
Trav14-1A0A0G2JF94 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC15.92■□□□□ 0.14
Trav14-1A0A0G2JF94 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav14-1A0A0G2JF94 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav14-1A0A0G2JF94 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav14-1A0A0G2JF94 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav14-1A0A0G2JF94 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav14-1A0A0G2JF94 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav14-1A0A0G2JF94 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC15.91■□□□□ 0.14
Trav14-1A0A0G2JF94 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Trav14-1A0A0G2JF94 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav14-1A0A0G2JF94 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav14-1A0A0G2JF94 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav14-1A0A0G2JF94 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav14-1A0A0G2JF94 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav14-1A0A0G2JF94 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav14-1A0A0G2JF94 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav14-1A0A0G2JF94 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Trav14-1A0A0G2JF94 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav14-1A0A0G2JF94 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav14-1A0A0G2JF94 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav14-1A0A0G2JF94 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav14-1A0A0G2JF94 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav14-1A0A0G2JF94 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav14-1A0A0G2JF94 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav14-1A0A0G2JF94 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav14-1A0A0G2JF94 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav14-1A0A0G2JF94 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav14-1A0A0G2JF94 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav14-1A0A0G2JF94 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Trav14-1A0A0G2JF94 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav14-1A0A0G2JF94 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav14-1A0A0G2JF94 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Trav14-1A0A0G2JF94 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav14-1A0A0G2JF94 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav14-1A0A0G2JF94 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav14-1A0A0G2JF94 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav14-1A0A0G2JF94 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav14-1A0A0G2JF94 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC15.82■□□□□ 0.12
Trav14-1A0A0G2JF94 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav14-1A0A0G2JF94 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav14-1A0A0G2JF94 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC15.81■□□□□ 0.12
Trav14-1A0A0G2JF94 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav14-1A0A0G2JF94 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav14-1A0A0G2JF94 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav14-1A0A0G2JF94 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav14-1A0A0G2JF94 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav14-1A0A0G2JF94 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav14-1A0A0G2JF94 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav14-1A0A0G2JF94 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
Trav14-1A0A0G2JF94 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Trav14-1A0A0G2JF94 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav14-1A0A0G2JF94 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC15.79■□□□□ 0.12
Trav14-1A0A0G2JF94 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav14-1A0A0G2JF94 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav14-1A0A0G2JF94 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC15.79■□□□□ 0.12
Trav14-1A0A0G2JF94 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Trav14-1A0A0G2JF94 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav14-1A0A0G2JF94 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav14-1A0A0G2JF94 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trav14-1A0A0G2JF94 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav14-1A0A0G2JF94 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav14-1A0A0G2JF94 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trav14-1A0A0G2JF94 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.11
Trav14-1A0A0G2JF94 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav14-1A0A0G2JF94 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC15.76■□□□□ 0.11
Trav14-1A0A0G2JF94 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav14-1A0A0G2JF94 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav14-1A0A0G2JF94 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
Trav14-1A0A0G2JF94 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav14-1A0A0G2JF94 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav14-1A0A0G2JF94 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav14-1A0A0G2JF94 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav14-1A0A0G2JF94 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav14-1A0A0G2JF94 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav14-1A0A0G2JF94 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav14-1A0A0G2JF94 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav14-1A0A0G2JF94 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav14-1A0A0G2JF94 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Trav14-1A0A0G2JF94 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav14-1A0A0G2JF94 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav14-1A0A0G2JF94 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav14-1A0A0G2JF94 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav14-1A0A0G2JF94 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav14-1A0A0G2JF94 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav14-1A0A0G2JF94 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav14-1A0A0G2JF94 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Trav14-1A0A0G2JF94 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav14-1A0A0G2JF94 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav14-1A0A0G2JF94 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav14-1A0A0G2JF94 Pcf11-205ENSMUST00000208255 1720 ntBASIC15.71■□□□□ 0.1
Trav14-1A0A0G2JF94 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms