Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Trav13n-1A0A0G2JEU8 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC17.42■□□□□ 0.38
Trav13n-1A0A0G2JEU8 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Trav13n-1A0A0G2JEU8 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav13n-1A0A0G2JEU8 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav13n-1A0A0G2JEU8 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trav13n-1A0A0G2JEU8 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trav13n-1A0A0G2JEU8 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav13n-1A0A0G2JEU8 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav13n-1A0A0G2JEU8 Gm43445-201ENSMUST00000198564 2091 ntBASIC17.4■□□□□ 0.38
Trav13n-1A0A0G2JEU8 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav13n-1A0A0G2JEU8 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trav13n-1A0A0G2JEU8 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav13n-1A0A0G2JEU8 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trav13n-1A0A0G2JEU8 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav13n-1A0A0G2JEU8 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trav13n-1A0A0G2JEU8 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav13n-1A0A0G2JEU8 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav13n-1A0A0G2JEU8 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trav13n-1A0A0G2JEU8 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC17.38■□□□□ 0.37
Trav13n-1A0A0G2JEU8 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav13n-1A0A0G2JEU8 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Trav13n-1A0A0G2JEU8 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav13n-1A0A0G2JEU8 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav13n-1A0A0G2JEU8 Gm8503-201ENSMUST00000118131 455 ntBASIC17.35■□□□□ 0.37
Trav13n-1A0A0G2JEU8 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav13n-1A0A0G2JEU8 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav13n-1A0A0G2JEU8 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trav13n-1A0A0G2JEU8 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav13n-1A0A0G2JEU8 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC17.34■□□□□ 0.37
Trav13n-1A0A0G2JEU8 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav13n-1A0A0G2JEU8 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav13n-1A0A0G2JEU8 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav13n-1A0A0G2JEU8 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Trav13n-1A0A0G2JEU8 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav13n-1A0A0G2JEU8 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trav13n-1A0A0G2JEU8 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC17.33■□□□□ 0.36
Trav13n-1A0A0G2JEU8 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav13n-1A0A0G2JEU8 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav13n-1A0A0G2JEU8 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trav13n-1A0A0G2JEU8 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trav13n-1A0A0G2JEU8 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trav13n-1A0A0G2JEU8 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trav13n-1A0A0G2JEU8 Amer2-203ENSMUST00000225247 2662 ntBASIC17.31■□□□□ 0.36
Trav13n-1A0A0G2JEU8 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav13n-1A0A0G2JEU8 Gm6345-201ENSMUST00000180378 1691 ntBASIC17.31■□□□□ 0.36
Trav13n-1A0A0G2JEU8 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav13n-1A0A0G2JEU8 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC17.29■□□□□ 0.36
Trav13n-1A0A0G2JEU8 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav13n-1A0A0G2JEU8 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Trav13n-1A0A0G2JEU8 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trav13n-1A0A0G2JEU8 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav13n-1A0A0G2JEU8 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav13n-1A0A0G2JEU8 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav13n-1A0A0G2JEU8 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav13n-1A0A0G2JEU8 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Trav13n-1A0A0G2JEU8 Nkain2-201ENSMUST00000092602 558 ntBASIC17.27■□□□□ 0.36
Trav13n-1A0A0G2JEU8 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav13n-1A0A0G2JEU8 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav13n-1A0A0G2JEU8 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav13n-1A0A0G2JEU8 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav13n-1A0A0G2JEU8 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
Trav13n-1A0A0G2JEU8 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav13n-1A0A0G2JEU8 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC17.25■□□□□ 0.35
Trav13n-1A0A0G2JEU8 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Trav13n-1A0A0G2JEU8 Gm42809-201ENSMUST00000198429 1138 ntBASIC17.25■□□□□ 0.35
Trav13n-1A0A0G2JEU8 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav13n-1A0A0G2JEU8 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav13n-1A0A0G2JEU8 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
Trav13n-1A0A0G2JEU8 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav13n-1A0A0G2JEU8 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav13n-1A0A0G2JEU8 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav13n-1A0A0G2JEU8 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav13n-1A0A0G2JEU8 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trav13n-1A0A0G2JEU8 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav13n-1A0A0G2JEU8 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav13n-1A0A0G2JEU8 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC17.22■□□□□ 0.35
Trav13n-1A0A0G2JEU8 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Trav13n-1A0A0G2JEU8 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav13n-1A0A0G2JEU8 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav13n-1A0A0G2JEU8 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav13n-1A0A0G2JEU8 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trav13n-1A0A0G2JEU8 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav13n-1A0A0G2JEU8 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav13n-1A0A0G2JEU8 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
Trav13n-1A0A0G2JEU8 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC17.19■□□□□ 0.34
Trav13n-1A0A0G2JEU8 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav13n-1A0A0G2JEU8 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Trav13n-1A0A0G2JEU8 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav13n-1A0A0G2JEU8 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav13n-1A0A0G2JEU8 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC17.18■□□□□ 0.34
Trav13n-1A0A0G2JEU8 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav13n-1A0A0G2JEU8 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav13n-1A0A0G2JEU8 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC17.17■□□□□ 0.34
Trav13n-1A0A0G2JEU8 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC17.16■□□□□ 0.34
Trav13n-1A0A0G2JEU8 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trav13n-1A0A0G2JEU8 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav13n-1A0A0G2JEU8 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav13n-1A0A0G2JEU8 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav13n-1A0A0G2JEU8 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms