Protein–RNA interactions for Protein: A0A0G2JES9

Igkv4-54, Immunoglobulin kappa chain variable 4-54 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-54A0A0G2JES9 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Igkv4-54A0A0G2JES9 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC17.35■□□□□ 0.37
Igkv4-54A0A0G2JES9 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC17.34■□□□□ 0.37
Igkv4-54A0A0G2JES9 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Igkv4-54A0A0G2JES9 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Igkv4-54A0A0G2JES9 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Igkv4-54A0A0G2JES9 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Igkv4-54A0A0G2JES9 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Igkv4-54A0A0G2JES9 Gm9905-201ENSMUST00000065740 1845 ntBASIC17.33■□□□□ 0.36
Igkv4-54A0A0G2JES9 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Igkv4-54A0A0G2JES9 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Igkv4-54A0A0G2JES9 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Igkv4-54A0A0G2JES9 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Igkv4-54A0A0G2JES9 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Igkv4-54A0A0G2JES9 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Igkv4-54A0A0G2JES9 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Igkv4-54A0A0G2JES9 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Igkv4-54A0A0G2JES9 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC17.31■□□□□ 0.36
Igkv4-54A0A0G2JES9 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC17.3■□□□□ 0.36
Igkv4-54A0A0G2JES9 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Igkv4-54A0A0G2JES9 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC17.29■□□□□ 0.36
Igkv4-54A0A0G2JES9 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Igkv4-54A0A0G2JES9 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Igkv4-54A0A0G2JES9 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Igkv4-54A0A0G2JES9 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Igkv4-54A0A0G2JES9 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC17.28■□□□□ 0.36
Igkv4-54A0A0G2JES9 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Igkv4-54A0A0G2JES9 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC17.28■□□□□ 0.36
Igkv4-54A0A0G2JES9 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC17.28■□□□□ 0.36
Igkv4-54A0A0G2JES9 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC17.27■□□□□ 0.36
Igkv4-54A0A0G2JES9 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Igkv4-54A0A0G2JES9 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Igkv4-54A0A0G2JES9 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Igkv4-54A0A0G2JES9 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Igkv4-54A0A0G2JES9 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Igkv4-54A0A0G2JES9 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Igkv4-54A0A0G2JES9 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Igkv4-54A0A0G2JES9 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Igkv4-54A0A0G2JES9 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Igkv4-54A0A0G2JES9 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Igkv4-54A0A0G2JES9 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Igkv4-54A0A0G2JES9 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC17.25■□□□□ 0.35
Igkv4-54A0A0G2JES9 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Igkv4-54A0A0G2JES9 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Igkv4-54A0A0G2JES9 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC17.23■□□□□ 0.35
Igkv4-54A0A0G2JES9 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC17.23■□□□□ 0.35
Igkv4-54A0A0G2JES9 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Igkv4-54A0A0G2JES9 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Igkv4-54A0A0G2JES9 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.22■□□□□ 0.35
Igkv4-54A0A0G2JES9 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Igkv4-54A0A0G2JES9 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC17.21■□□□□ 0.35
Igkv4-54A0A0G2JES9 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Igkv4-54A0A0G2JES9 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
Igkv4-54A0A0G2JES9 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC17.21■□□□□ 0.35
Igkv4-54A0A0G2JES9 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Igkv4-54A0A0G2JES9 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Igkv4-54A0A0G2JES9 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Igkv4-54A0A0G2JES9 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Igkv4-54A0A0G2JES9 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Igkv4-54A0A0G2JES9 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Igkv4-54A0A0G2JES9 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Igkv4-54A0A0G2JES9 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Igkv4-54A0A0G2JES9 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Igkv4-54A0A0G2JES9 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Igkv4-54A0A0G2JES9 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Igkv4-54A0A0G2JES9 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Igkv4-54A0A0G2JES9 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Igkv4-54A0A0G2JES9 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Igkv4-54A0A0G2JES9 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Igkv4-54A0A0G2JES9 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Igkv4-54A0A0G2JES9 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Igkv4-54A0A0G2JES9 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Igkv4-54A0A0G2JES9 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Igkv4-54A0A0G2JES9 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Igkv4-54A0A0G2JES9 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Igkv4-54A0A0G2JES9 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC17.15■□□□□ 0.34
Igkv4-54A0A0G2JES9 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Igkv4-54A0A0G2JES9 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Igkv4-54A0A0G2JES9 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Igkv4-54A0A0G2JES9 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC17.14■□□□□ 0.33
Igkv4-54A0A0G2JES9 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Igkv4-54A0A0G2JES9 Amer2-203ENSMUST00000225247 2662 ntBASIC17.14■□□□□ 0.33
Igkv4-54A0A0G2JES9 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Igkv4-54A0A0G2JES9 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Igkv4-54A0A0G2JES9 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Igkv4-54A0A0G2JES9 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Igkv4-54A0A0G2JES9 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Igkv4-54A0A0G2JES9 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Igkv4-54A0A0G2JES9 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Igkv4-54A0A0G2JES9 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Igkv4-54A0A0G2JES9 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Igkv4-54A0A0G2JES9 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Igkv4-54A0A0G2JES9 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Igkv4-54A0A0G2JES9 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Igkv4-54A0A0G2JES9 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC17.11■□□□□ 0.33
Igkv4-54A0A0G2JES9 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Igkv4-54A0A0G2JES9 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Igkv4-54A0A0G2JES9 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC17.1■□□□□ 0.33
Igkv4-54A0A0G2JES9 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Igkv4-54A0A0G2JES9 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms