Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav9n-2A0A0G2JDP3 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav9n-2A0A0G2JDP3 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC17.56■□□□□ 0.4
Trav9n-2A0A0G2JDP3 Tdp2-203ENSMUST00000223804 1136 ntBASIC17.56■□□□□ 0.4
Trav9n-2A0A0G2JDP3 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav9n-2A0A0G2JDP3 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav9n-2A0A0G2JDP3 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav9n-2A0A0G2JDP3 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav9n-2A0A0G2JDP3 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Trav9n-2A0A0G2JDP3 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav9n-2A0A0G2JDP3 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav9n-2A0A0G2JDP3 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trav9n-2A0A0G2JDP3 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trav9n-2A0A0G2JDP3 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav9n-2A0A0G2JDP3 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav9n-2A0A0G2JDP3 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC17.54■□□□□ 0.4
Trav9n-2A0A0G2JDP3 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC17.53■□□□□ 0.4
Trav9n-2A0A0G2JDP3 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC17.53■□□□□ 0.4
Trav9n-2A0A0G2JDP3 Gm43863-201ENSMUST00000203822 1192 ntBASIC17.53■□□□□ 0.4
Trav9n-2A0A0G2JDP3 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC17.52■□□□□ 0.4
Trav9n-2A0A0G2JDP3 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC17.52■□□□□ 0.4
Trav9n-2A0A0G2JDP3 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trav9n-2A0A0G2JDP3 Gm9397-201ENSMUST00000200125 605 ntBASIC17.52■□□□□ 0.4
Trav9n-2A0A0G2JDP3 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav9n-2A0A0G2JDP3 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Trav9n-2A0A0G2JDP3 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav9n-2A0A0G2JDP3 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav9n-2A0A0G2JDP3 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav9n-2A0A0G2JDP3 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav9n-2A0A0G2JDP3 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav9n-2A0A0G2JDP3 Gm45855-201ENSMUST00000212546 880 ntBASIC17.49■□□□□ 0.39
Trav9n-2A0A0G2JDP3 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC17.49■□□□□ 0.39
Trav9n-2A0A0G2JDP3 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav9n-2A0A0G2JDP3 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Trav9n-2A0A0G2JDP3 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC17.48■□□□□ 0.39
Trav9n-2A0A0G2JDP3 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav9n-2A0A0G2JDP3 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Trav9n-2A0A0G2JDP3 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav9n-2A0A0G2JDP3 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav9n-2A0A0G2JDP3 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trav9n-2A0A0G2JDP3 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trav9n-2A0A0G2JDP3 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav9n-2A0A0G2JDP3 Fezf2-202ENSMUST00000224023 1917 ntBASIC17.47■□□□□ 0.39
Trav9n-2A0A0G2JDP3 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav9n-2A0A0G2JDP3 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav9n-2A0A0G2JDP3 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav9n-2A0A0G2JDP3 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trav9n-2A0A0G2JDP3 AC157572.2-201ENSMUST00000226970 908 ntBASIC17.46■□□□□ 0.39
Trav9n-2A0A0G2JDP3 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav9n-2A0A0G2JDP3 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav9n-2A0A0G2JDP3 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav9n-2A0A0G2JDP3 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav9n-2A0A0G2JDP3 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav9n-2A0A0G2JDP3 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC17.43■□□□□ 0.38
Trav9n-2A0A0G2JDP3 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav9n-2A0A0G2JDP3 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav9n-2A0A0G2JDP3 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav9n-2A0A0G2JDP3 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav9n-2A0A0G2JDP3 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Trav9n-2A0A0G2JDP3 Gm24970-201ENSMUST00000175582 82 ntBASIC17.42■□□□□ 0.38
Trav9n-2A0A0G2JDP3 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav9n-2A0A0G2JDP3 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav9n-2A0A0G2JDP3 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Trav9n-2A0A0G2JDP3 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav9n-2A0A0G2JDP3 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Trav9n-2A0A0G2JDP3 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Trav9n-2A0A0G2JDP3 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trav9n-2A0A0G2JDP3 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav9n-2A0A0G2JDP3 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav9n-2A0A0G2JDP3 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC17.39■□□□□ 0.38
Trav9n-2A0A0G2JDP3 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav9n-2A0A0G2JDP3 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC17.39■□□□□ 0.37
Trav9n-2A0A0G2JDP3 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav9n-2A0A0G2JDP3 Pcf11-205ENSMUST00000208255 1720 ntBASIC17.38■□□□□ 0.37
Trav9n-2A0A0G2JDP3 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav9n-2A0A0G2JDP3 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC17.37■□□□□ 0.37
Trav9n-2A0A0G2JDP3 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Trav9n-2A0A0G2JDP3 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC17.36■□□□□ 0.37
Trav9n-2A0A0G2JDP3 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Trav9n-2A0A0G2JDP3 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav9n-2A0A0G2JDP3 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav9n-2A0A0G2JDP3 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Trav9n-2A0A0G2JDP3 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav9n-2A0A0G2JDP3 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav9n-2A0A0G2JDP3 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Trav9n-2A0A0G2JDP3 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav9n-2A0A0G2JDP3 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav9n-2A0A0G2JDP3 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav9n-2A0A0G2JDP3 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC17.32■□□□□ 0.36
Trav9n-2A0A0G2JDP3 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav9n-2A0A0G2JDP3 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav9n-2A0A0G2JDP3 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav9n-2A0A0G2JDP3 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav9n-2A0A0G2JDP3 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav9n-2A0A0G2JDP3 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav9n-2A0A0G2JDP3 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trav9n-2A0A0G2JDP3 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trav9n-2A0A0G2JDP3 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC17.3■□□□□ 0.36
Trav9n-2A0A0G2JDP3 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trav9n-2A0A0G2JDP3 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms