Protein–RNA interactions for Protein: A0A075B645

Trav14n-3, T cell receptor alpha variable 14N-3 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14n-3A0A075B645 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Trav14n-3A0A075B645 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav14n-3A0A075B645 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trav14n-3A0A075B645 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trav14n-3A0A075B645 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC18.24■□□□□ 0.51
Trav14n-3A0A075B645 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC18.24■□□□□ 0.51
Trav14n-3A0A075B645 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav14n-3A0A075B645 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav14n-3A0A075B645 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav14n-3A0A075B645 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav14n-3A0A075B645 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav14n-3A0A075B645 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
Trav14n-3A0A075B645 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav14n-3A0A075B645 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC18.21■□□□□ 0.51
Trav14n-3A0A075B645 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav14n-3A0A075B645 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav14n-3A0A075B645 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
Trav14n-3A0A075B645 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav14n-3A0A075B645 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav14n-3A0A075B645 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav14n-3A0A075B645 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trav14n-3A0A075B645 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav14n-3A0A075B645 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav14n-3A0A075B645 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC18.19■□□□□ 0.5
Trav14n-3A0A075B645 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav14n-3A0A075B645 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav14n-3A0A075B645 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav14n-3A0A075B645 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav14n-3A0A075B645 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav14n-3A0A075B645 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav14n-3A0A075B645 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav14n-3A0A075B645 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Trav14n-3A0A075B645 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav14n-3A0A075B645 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Trav14n-3A0A075B645 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Trav14n-3A0A075B645 AC166822.3-201ENSMUST00000227394 661 ntBASIC18.15■□□□□ 0.5
Trav14n-3A0A075B645 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Trav14n-3A0A075B645 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trav14n-3A0A075B645 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav14n-3A0A075B645 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav14n-3A0A075B645 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav14n-3A0A075B645 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav14n-3A0A075B645 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav14n-3A0A075B645 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav14n-3A0A075B645 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Trav14n-3A0A075B645 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav14n-3A0A075B645 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav14n-3A0A075B645 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav14n-3A0A075B645 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trav14n-3A0A075B645 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav14n-3A0A075B645 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav14n-3A0A075B645 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Trav14n-3A0A075B645 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav14n-3A0A075B645 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav14n-3A0A075B645 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Trav14n-3A0A075B645 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav14n-3A0A075B645 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav14n-3A0A075B645 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav14n-3A0A075B645 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav14n-3A0A075B645 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trav14n-3A0A075B645 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC18.06■□□□□ 0.48
Trav14n-3A0A075B645 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav14n-3A0A075B645 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Trav14n-3A0A075B645 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.05■□□□□ 0.48
Trav14n-3A0A075B645 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav14n-3A0A075B645 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trav14n-3A0A075B645 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav14n-3A0A075B645 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav14n-3A0A075B645 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav14n-3A0A075B645 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.04■□□□□ 0.48
Trav14n-3A0A075B645 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav14n-3A0A075B645 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Trav14n-3A0A075B645 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trav14n-3A0A075B645 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trav14n-3A0A075B645 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav14n-3A0A075B645 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav14n-3A0A075B645 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav14n-3A0A075B645 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Trav14n-3A0A075B645 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav14n-3A0A075B645 AC122428.3-201ENSMUST00000215551 2290 ntBASIC18.02■□□□□ 0.47
Trav14n-3A0A075B645 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trav14n-3A0A075B645 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav14n-3A0A075B645 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav14n-3A0A075B645 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav14n-3A0A075B645 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC18.01■□□□□ 0.47
Trav14n-3A0A075B645 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav14n-3A0A075B645 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav14n-3A0A075B645 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav14n-3A0A075B645 Il17rd-202ENSMUST00000223942 2186 ntBASIC18■□□□□ 0.47
Trav14n-3A0A075B645 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav14n-3A0A075B645 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Trav14n-3A0A075B645 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC17.98■□□□□ 0.47
Trav14n-3A0A075B645 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Trav14n-3A0A075B645 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav14n-3A0A075B645 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav14n-3A0A075B645 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav14n-3A0A075B645 Pcf11-205ENSMUST00000208255 1720 ntBASIC17.98■□□□□ 0.47
Trav14n-3A0A075B645 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav14n-3A0A075B645 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav14n-3A0A075B645 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms