Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Trav5-1A0A075B5Z7 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Trav5-1A0A075B5Z7 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Trav5-1A0A075B5Z7 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trav5-1A0A075B5Z7 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.09■□□□□ 0.97
Trav5-1A0A075B5Z7 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trav5-1A0A075B5Z7 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trav5-1A0A075B5Z7 Gm8503-201ENSMUST00000118131 455 ntBASIC21.08■□□□□ 0.97
Trav5-1A0A075B5Z7 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trav5-1A0A075B5Z7 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Trav5-1A0A075B5Z7 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Trav5-1A0A075B5Z7 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trav5-1A0A075B5Z7 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Trav5-1A0A075B5Z7 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trav5-1A0A075B5Z7 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Trav5-1A0A075B5Z7 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trav5-1A0A075B5Z7 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trav5-1A0A075B5Z7 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.05■□□□□ 0.96
Trav5-1A0A075B5Z7 Nkain2-201ENSMUST00000092602 558 ntBASIC21.05■□□□□ 0.96
Trav5-1A0A075B5Z7 Zxda-201ENSMUST00000117281 2621 ntBASIC21.04■□□□□ 0.96
Trav5-1A0A075B5Z7 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.03■□□□□ 0.96
Trav5-1A0A075B5Z7 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.02■□□□□ 0.96
Trav5-1A0A075B5Z7 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
Trav5-1A0A075B5Z7 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Trav5-1A0A075B5Z7 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trav5-1A0A075B5Z7 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trav5-1A0A075B5Z7 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21■□□□□ 0.95
Trav5-1A0A075B5Z7 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trav5-1A0A075B5Z7 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trav5-1A0A075B5Z7 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trav5-1A0A075B5Z7 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trav5-1A0A075B5Z7 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Trav5-1A0A075B5Z7 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Trav5-1A0A075B5Z7 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.97■□□□□ 0.95
Trav5-1A0A075B5Z7 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.97■□□□□ 0.95
Trav5-1A0A075B5Z7 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.95■□□□□ 0.94
Trav5-1A0A075B5Z7 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Trav5-1A0A075B5Z7 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trav5-1A0A075B5Z7 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trav5-1A0A075B5Z7 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Trav5-1A0A075B5Z7 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trav5-1A0A075B5Z7 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trav5-1A0A075B5Z7 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Trav5-1A0A075B5Z7 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.93■□□□□ 0.94
Trav5-1A0A075B5Z7 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.93■□□□□ 0.94
Trav5-1A0A075B5Z7 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trav5-1A0A075B5Z7 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trav5-1A0A075B5Z7 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trav5-1A0A075B5Z7 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.92■□□□□ 0.94
Trav5-1A0A075B5Z7 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Trav5-1A0A075B5Z7 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Trav5-1A0A075B5Z7 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trav5-1A0A075B5Z7 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trav5-1A0A075B5Z7 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.89■□□□□ 0.93
Trav5-1A0A075B5Z7 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trav5-1A0A075B5Z7 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Trav5-1A0A075B5Z7 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trav5-1A0A075B5Z7 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trav5-1A0A075B5Z7 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trav5-1A0A075B5Z7 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Trav5-1A0A075B5Z7 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.88■□□□□ 0.93
Trav5-1A0A075B5Z7 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Trav5-1A0A075B5Z7 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.87■□□□□ 0.93
Trav5-1A0A075B5Z7 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trav5-1A0A075B5Z7 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.87■□□□□ 0.93
Trav5-1A0A075B5Z7 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.86■□□□□ 0.93
Trav5-1A0A075B5Z7 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
Trav5-1A0A075B5Z7 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Trav5-1A0A075B5Z7 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trav5-1A0A075B5Z7 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.86■□□□□ 0.93
Trav5-1A0A075B5Z7 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trav5-1A0A075B5Z7 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trav5-1A0A075B5Z7 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trav5-1A0A075B5Z7 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Trav5-1A0A075B5Z7 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.85■□□□□ 0.93
Trav5-1A0A075B5Z7 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.84■□□□□ 0.93
Trav5-1A0A075B5Z7 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.83■□□□□ 0.93
Trav5-1A0A075B5Z7 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trav5-1A0A075B5Z7 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trav5-1A0A075B5Z7 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Trav5-1A0A075B5Z7 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trav5-1A0A075B5Z7 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Trav5-1A0A075B5Z7 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trav5-1A0A075B5Z7 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trav5-1A0A075B5Z7 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.8■□□□□ 0.92
Trav5-1A0A075B5Z7 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Trav5-1A0A075B5Z7 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.8■□□□□ 0.92
Trav5-1A0A075B5Z7 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trav5-1A0A075B5Z7 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trav5-1A0A075B5Z7 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trav5-1A0A075B5Z7 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trav5-1A0A075B5Z7 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.79■□□□□ 0.92
Trav5-1A0A075B5Z7 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trav5-1A0A075B5Z7 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Trav5-1A0A075B5Z7 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
Trav5-1A0A075B5Z7 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trav5-1A0A075B5Z7 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trav5-1A0A075B5Z7 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Trav5-1A0A075B5Z7 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Trav5-1A0A075B5Z7 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms