Protein–RNA interactions for Protein: A0A075B5W5

Ighv1-54, Immunoglobulin heavy variable V1-54 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-54A0A075B5W5 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ighv1-54A0A075B5W5 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ighv1-54A0A075B5W5 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.94■■□□□ 1.1
Ighv1-54A0A075B5W5 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ighv1-54A0A075B5W5 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ighv1-54A0A075B5W5 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ighv1-54A0A075B5W5 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ighv1-54A0A075B5W5 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ighv1-54A0A075B5W5 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ighv1-54A0A075B5W5 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Ighv1-54A0A075B5W5 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Ighv1-54A0A075B5W5 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.89■■□□□ 1.09
Ighv1-54A0A075B5W5 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.88■■□□□ 1.09
Ighv1-54A0A075B5W5 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Ighv1-54A0A075B5W5 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ighv1-54A0A075B5W5 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ighv1-54A0A075B5W5 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ighv1-54A0A075B5W5 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.86■■□□□ 1.09
Ighv1-54A0A075B5W5 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ighv1-54A0A075B5W5 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ighv1-54A0A075B5W5 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.85■■□□□ 1.09
Ighv1-54A0A075B5W5 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ighv1-54A0A075B5W5 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Ighv1-54A0A075B5W5 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Ighv1-54A0A075B5W5 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ighv1-54A0A075B5W5 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Ighv1-54A0A075B5W5 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ighv1-54A0A075B5W5 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ighv1-54A0A075B5W5 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Ighv1-54A0A075B5W5 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.82■■□□□ 1.08
Ighv1-54A0A075B5W5 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ighv1-54A0A075B5W5 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.82■■□□□ 1.08
Ighv1-54A0A075B5W5 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ighv1-54A0A075B5W5 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ighv1-54A0A075B5W5 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ighv1-54A0A075B5W5 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ighv1-54A0A075B5W5 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.78■■□□□ 1.08
Ighv1-54A0A075B5W5 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ighv1-54A0A075B5W5 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ighv1-54A0A075B5W5 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Ighv1-54A0A075B5W5 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ighv1-54A0A075B5W5 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Ighv1-54A0A075B5W5 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ighv1-54A0A075B5W5 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ighv1-54A0A075B5W5 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Ighv1-54A0A075B5W5 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ighv1-54A0A075B5W5 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.75■■□□□ 1.07
Ighv1-54A0A075B5W5 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.75■■□□□ 1.07
Ighv1-54A0A075B5W5 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ighv1-54A0A075B5W5 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ighv1-54A0A075B5W5 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ighv1-54A0A075B5W5 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ighv1-54A0A075B5W5 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC21.71■■□□□ 1.07
Ighv1-54A0A075B5W5 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ighv1-54A0A075B5W5 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ighv1-54A0A075B5W5 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ighv1-54A0A075B5W5 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ighv1-54A0A075B5W5 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC21.7■■□□□ 1.06
Ighv1-54A0A075B5W5 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ighv1-54A0A075B5W5 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Ighv1-54A0A075B5W5 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ighv1-54A0A075B5W5 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Ighv1-54A0A075B5W5 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Ighv1-54A0A075B5W5 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ighv1-54A0A075B5W5 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21.66■■□□□ 1.06
Ighv1-54A0A075B5W5 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.66■■□□□ 1.06
Ighv1-54A0A075B5W5 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ighv1-54A0A075B5W5 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.65■■□□□ 1.06
Ighv1-54A0A075B5W5 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
Ighv1-54A0A075B5W5 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ighv1-54A0A075B5W5 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ighv1-54A0A075B5W5 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ighv1-54A0A075B5W5 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.63■■□□□ 1.05
Ighv1-54A0A075B5W5 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ighv1-54A0A075B5W5 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ighv1-54A0A075B5W5 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ighv1-54A0A075B5W5 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ighv1-54A0A075B5W5 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ighv1-54A0A075B5W5 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.61■■□□□ 1.05
Ighv1-54A0A075B5W5 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ighv1-54A0A075B5W5 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ighv1-54A0A075B5W5 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ighv1-54A0A075B5W5 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.61■■□□□ 1.05
Ighv1-54A0A075B5W5 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ighv1-54A0A075B5W5 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ighv1-54A0A075B5W5 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ighv1-54A0A075B5W5 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC21.58■■□□□ 1.05
Ighv1-54A0A075B5W5 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ighv1-54A0A075B5W5 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ighv1-54A0A075B5W5 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ighv1-54A0A075B5W5 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ighv1-54A0A075B5W5 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Ighv1-54A0A075B5W5 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Ighv1-54A0A075B5W5 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ighv1-54A0A075B5W5 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ighv1-54A0A075B5W5 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ighv1-54A0A075B5W5 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ighv1-54A0A075B5W5 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ighv1-54A0A075B5W5 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
Ighv1-54A0A075B5W5 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms