Protein–RNA interactions for Protein: A0A075B5W3

Ighv1-53, Immunoglobulin heavy variable 1-53 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-53A0A075B5W3 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ighv1-53A0A075B5W3 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ighv1-53A0A075B5W3 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ighv1-53A0A075B5W3 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ighv1-53A0A075B5W3 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC18.36■□□□□ 0.53
Ighv1-53A0A075B5W3 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ighv1-53A0A075B5W3 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ighv1-53A0A075B5W3 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ighv1-53A0A075B5W3 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ighv1-53A0A075B5W3 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ighv1-53A0A075B5W3 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ighv1-53A0A075B5W3 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Ighv1-53A0A075B5W3 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ighv1-53A0A075B5W3 Pcf11-205ENSMUST00000208255 1720 ntBASIC18.33■□□□□ 0.52
Ighv1-53A0A075B5W3 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC18.33■□□□□ 0.52
Ighv1-53A0A075B5W3 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ighv1-53A0A075B5W3 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ighv1-53A0A075B5W3 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ighv1-53A0A075B5W3 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ighv1-53A0A075B5W3 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Ighv1-53A0A075B5W3 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC18.31■□□□□ 0.52
Ighv1-53A0A075B5W3 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ighv1-53A0A075B5W3 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ighv1-53A0A075B5W3 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ighv1-53A0A075B5W3 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ighv1-53A0A075B5W3 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ighv1-53A0A075B5W3 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv1-53A0A075B5W3 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ighv1-53A0A075B5W3 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ighv1-53A0A075B5W3 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Ighv1-53A0A075B5W3 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Ighv1-53A0A075B5W3 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ighv1-53A0A075B5W3 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC18.24■□□□□ 0.51
Ighv1-53A0A075B5W3 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ighv1-53A0A075B5W3 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Ighv1-53A0A075B5W3 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ighv1-53A0A075B5W3 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ighv1-53A0A075B5W3 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ighv1-53A0A075B5W3 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ighv1-53A0A075B5W3 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ighv1-53A0A075B5W3 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ighv1-53A0A075B5W3 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ighv1-53A0A075B5W3 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Ighv1-53A0A075B5W3 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ighv1-53A0A075B5W3 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ighv1-53A0A075B5W3 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Ighv1-53A0A075B5W3 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ighv1-53A0A075B5W3 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Ighv1-53A0A075B5W3 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Ighv1-53A0A075B5W3 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC18.18■□□□□ 0.5
Ighv1-53A0A075B5W3 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ighv1-53A0A075B5W3 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC18.18■□□□□ 0.5
Ighv1-53A0A075B5W3 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ighv1-53A0A075B5W3 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ighv1-53A0A075B5W3 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ighv1-53A0A075B5W3 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ighv1-53A0A075B5W3 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ighv1-53A0A075B5W3 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ighv1-53A0A075B5W3 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ighv1-53A0A075B5W3 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ighv1-53A0A075B5W3 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ighv1-53A0A075B5W3 Gm43863-201ENSMUST00000203822 1192 ntBASIC18.15■□□□□ 0.5
Ighv1-53A0A075B5W3 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ighv1-53A0A075B5W3 Zfp131-205ENSMUST00000223812 663 ntBASIC18.14■□□□□ 0.49
Ighv1-53A0A075B5W3 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ighv1-53A0A075B5W3 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Ighv1-53A0A075B5W3 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Ighv1-53A0A075B5W3 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Ighv1-53A0A075B5W3 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC18.12■□□□□ 0.49
Ighv1-53A0A075B5W3 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ighv1-53A0A075B5W3 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Ighv1-53A0A075B5W3 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC18.11■□□□□ 0.49
Ighv1-53A0A075B5W3 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Ighv1-53A0A075B5W3 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv1-53A0A075B5W3 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv1-53A0A075B5W3 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ighv1-53A0A075B5W3 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ighv1-53A0A075B5W3 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC18.1■□□□□ 0.49
Ighv1-53A0A075B5W3 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ighv1-53A0A075B5W3 AC157572.2-201ENSMUST00000226970 908 ntBASIC18.09■□□□□ 0.49
Ighv1-53A0A075B5W3 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ighv1-53A0A075B5W3 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Ighv1-53A0A075B5W3 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ighv1-53A0A075B5W3 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC18.08■□□□□ 0.48
Ighv1-53A0A075B5W3 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ighv1-53A0A075B5W3 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Ighv1-53A0A075B5W3 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ighv1-53A0A075B5W3 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC18.07■□□□□ 0.48
Ighv1-53A0A075B5W3 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ighv1-53A0A075B5W3 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ighv1-53A0A075B5W3 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
Ighv1-53A0A075B5W3 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ighv1-53A0A075B5W3 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ighv1-53A0A075B5W3 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ighv1-53A0A075B5W3 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ighv1-53A0A075B5W3 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ighv1-53A0A075B5W3 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ighv1-53A0A075B5W3 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Ighv1-53A0A075B5W3 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ighv1-53A0A075B5W3 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms