Protein–RNA interactions for Protein: Q9JL35

Hmgn5, High mobility group nucleosome-binding domain-containing protein 5, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn5Q9JL35 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hmgn5Q9JL35 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hmgn5Q9JL35 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Hmgn5Q9JL35 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC20.09■□□□□ 0.81
Hmgn5Q9JL35 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hmgn5Q9JL35 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Hmgn5Q9JL35 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
Hmgn5Q9JL35 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC20.08■□□□□ 0.81
Hmgn5Q9JL35 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hmgn5Q9JL35 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hmgn5Q9JL35 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hmgn5Q9JL35 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hmgn5Q9JL35 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
Hmgn5Q9JL35 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hmgn5Q9JL35 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Hmgn5Q9JL35 Gm37519-201ENSMUST00000191687 2210 ntBASIC20.08■□□□□ 0.8
Hmgn5Q9JL35 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Hmgn5Q9JL35 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Hmgn5Q9JL35 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Hmgn5Q9JL35 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Hmgn5Q9JL35 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Hmgn5Q9JL35 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Hmgn5Q9JL35 Gm38345-201ENSMUST00000192635 1748 ntBASIC20.07■□□□□ 0.8
Hmgn5Q9JL35 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Hmgn5Q9JL35 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hmgn5Q9JL35 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Hmgn5Q9JL35 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Hmgn5Q9JL35 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Hmgn5Q9JL35 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hmgn5Q9JL35 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.07■□□□□ 0.8
Hmgn5Q9JL35 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Hmgn5Q9JL35 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Hmgn5Q9JL35 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Hmgn5Q9JL35 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hmgn5Q9JL35 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Hmgn5Q9JL35 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hmgn5Q9JL35 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Hmgn5Q9JL35 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.07■□□□□ 0.8
Hmgn5Q9JL35 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC20.07■□□□□ 0.8
Hmgn5Q9JL35 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hmgn5Q9JL35 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hmgn5Q9JL35 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hmgn5Q9JL35 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hmgn5Q9JL35 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Hmgn5Q9JL35 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Hmgn5Q9JL35 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.06■□□□□ 0.8
Hmgn5Q9JL35 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hmgn5Q9JL35 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hmgn5Q9JL35 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC20.06■□□□□ 0.8
Hmgn5Q9JL35 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
Hmgn5Q9JL35 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Hmgn5Q9JL35 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC20.06■□□□□ 0.8
Hmgn5Q9JL35 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC20.06■□□□□ 0.8
Hmgn5Q9JL35 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Hmgn5Q9JL35 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hmgn5Q9JL35 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hmgn5Q9JL35 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hmgn5Q9JL35 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hmgn5Q9JL35 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.06■□□□□ 0.8
Hmgn5Q9JL35 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hmgn5Q9JL35 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hmgn5Q9JL35 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hmgn5Q9JL35 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hmgn5Q9JL35 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hmgn5Q9JL35 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hmgn5Q9JL35 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hmgn5Q9JL35 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hmgn5Q9JL35 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hmgn5Q9JL35 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Hmgn5Q9JL35 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hmgn5Q9JL35 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Hmgn5Q9JL35 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hmgn5Q9JL35 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hmgn5Q9JL35 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hmgn5Q9JL35 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Hmgn5Q9JL35 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hmgn5Q9JL35 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Hmgn5Q9JL35 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.04■□□□□ 0.8
Hmgn5Q9JL35 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hmgn5Q9JL35 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Hmgn5Q9JL35 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Hmgn5Q9JL35 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hmgn5Q9JL35 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hmgn5Q9JL35 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Hmgn5Q9JL35 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hmgn5Q9JL35 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hmgn5Q9JL35 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hmgn5Q9JL35 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hmgn5Q9JL35 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hmgn5Q9JL35 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hmgn5Q9JL35 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hmgn5Q9JL35 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hmgn5Q9JL35 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.03■□□□□ 0.8
Hmgn5Q9JL35 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hmgn5Q9JL35 Gm9847-201ENSMUST00000052528 599 ntBASIC20.03■□□□□ 0.8
Hmgn5Q9JL35 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Hmgn5Q9JL35 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Hmgn5Q9JL35 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hmgn5Q9JL35 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hmgn5Q9JL35 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms