Protein–RNA interactions for Protein: Q8R043

Smim29, Uncharacterized protein SMIM29, mousemouse

Predictions only

Length 75 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim29Q8R043 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smim29Q8R043 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Smim29Q8R043 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smim29Q8R043 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smim29Q8R043 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Smim29Q8R043 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC11.33□□□□□ -0.6
Smim29Q8R043 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smim29Q8R043 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Smim29Q8R043 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smim29Q8R043 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smim29Q8R043 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smim29Q8R043 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Smim29Q8R043 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smim29Q8R043 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Smim29Q8R043 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Smim29Q8R043 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC11.32□□□□□ -0.6
Smim29Q8R043 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Smim29Q8R043 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smim29Q8R043 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC11.32□□□□□ -0.6
Smim29Q8R043 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Smim29Q8R043 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smim29Q8R043 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smim29Q8R043 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smim29Q8R043 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smim29Q8R043 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smim29Q8R043 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smim29Q8R043 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Smim29Q8R043 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Smim29Q8R043 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smim29Q8R043 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smim29Q8R043 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smim29Q8R043 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smim29Q8R043 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Smim29Q8R043 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Smim29Q8R043 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC11.31□□□□□ -0.6
Smim29Q8R043 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC11.31□□□□□ -0.6
Smim29Q8R043 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Smim29Q8R043 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC11.31□□□□□ -0.6
Smim29Q8R043 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Smim29Q8R043 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smim29Q8R043 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
Smim29Q8R043 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Smim29Q8R043 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smim29Q8R043 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Smim29Q8R043 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smim29Q8R043 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
Smim29Q8R043 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Smim29Q8R043 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smim29Q8R043 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smim29Q8R043 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Smim29Q8R043 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Smim29Q8R043 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smim29Q8R043 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smim29Q8R043 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC11.3□□□□□ -0.6
Smim29Q8R043 Idnk-204ENSMUST00000226010 1898 ntBASIC11.3□□□□□ -0.6
Smim29Q8R043 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smim29Q8R043 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smim29Q8R043 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Smim29Q8R043 Gm43338-201ENSMUST00000198617 2223 ntBASIC11.3□□□□□ -0.6
Smim29Q8R043 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smim29Q8R043 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC11.3□□□□□ -0.6
Smim29Q8R043 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC11.3□□□□□ -0.6
Smim29Q8R043 Gm22325-201ENSMUST00000158904 308 ntBASIC11.3□□□□□ -0.6
Smim29Q8R043 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smim29Q8R043 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Smim29Q8R043 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC11.3□□□□□ -0.6
Smim29Q8R043 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smim29Q8R043 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC11.3□□□□□ -0.6
Smim29Q8R043 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Smim29Q8R043 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smim29Q8R043 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC11.3□□□□□ -0.6
Smim29Q8R043 Gm5898-201ENSMUST00000121016 2071 ntBASIC11.3□□□□□ -0.6
Smim29Q8R043 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smim29Q8R043 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smim29Q8R043 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smim29Q8R043 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smim29Q8R043 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smim29Q8R043 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC11.3□□□□□ -0.6
Smim29Q8R043 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smim29Q8R043 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Smim29Q8R043 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Smim29Q8R043 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Smim29Q8R043 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smim29Q8R043 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
Smim29Q8R043 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smim29Q8R043 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Smim29Q8R043 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smim29Q8R043 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC11.29□□□□□ -0.6
Smim29Q8R043 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smim29Q8R043 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smim29Q8R043 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Smim29Q8R043 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smim29Q8R043 Gm42642-201ENSMUST00000200683 355 ntBASIC11.29□□□□□ -0.6
Smim29Q8R043 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smim29Q8R043 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smim29Q8R043 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smim29Q8R043 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC11.29□□□□□ -0.6
Smim29Q8R043 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smim29Q8R043 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smim29Q8R043 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms