Protein–RNA interactions for Protein: O88623

Usp2, Ubiquitin carboxyl-terminal hydrolase 2, mousemouse

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp2O88623 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp2O88623 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp2O88623 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp2O88623 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Usp2O88623 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp2O88623 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.13■□□□□ 0.49
Usp2O88623 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Usp2O88623 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp2O88623 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Usp2O88623 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.13■□□□□ 0.49
Usp2O88623 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.13■□□□□ 0.49
Usp2O88623 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Usp2O88623 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.13■□□□□ 0.49
Usp2O88623 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Usp2O88623 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp2O88623 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Usp2O88623 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp2O88623 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp2O88623 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp2O88623 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp2O88623 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Usp2O88623 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp2O88623 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.12■□□□□ 0.49
Usp2O88623 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp2O88623 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Usp2O88623 Gm13836-201ENSMUST00000121159 501 ntBASIC18.12■□□□□ 0.49
Usp2O88623 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp2O88623 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp2O88623 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp2O88623 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp2O88623 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp2O88623 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp2O88623 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp2O88623 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp2O88623 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp2O88623 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.11■□□□□ 0.49
Usp2O88623 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Usp2O88623 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp2O88623 Gm11643-201ENSMUST00000119578 864 ntBASIC18.11■□□□□ 0.49
Usp2O88623 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Usp2O88623 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Usp2O88623 Gm10517-202ENSMUST00000192970 758 ntBASIC18.11■□□□□ 0.49
Usp2O88623 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp2O88623 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.11■□□□□ 0.49
Usp2O88623 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp2O88623 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Usp2O88623 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp2O88623 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp2O88623 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Usp2O88623 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp2O88623 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp2O88623 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp2O88623 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp2O88623 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp2O88623 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp2O88623 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp2O88623 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Usp2O88623 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Usp2O88623 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
Usp2O88623 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.1■□□□□ 0.49
Usp2O88623 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.1■□□□□ 0.49
Usp2O88623 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.1■□□□□ 0.49
Usp2O88623 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.1■□□□□ 0.49
Usp2O88623 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Usp2O88623 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.1■□□□□ 0.49
Usp2O88623 Gm21814-202ENSMUST00000203277 873 ntBASIC18.1■□□□□ 0.49
Usp2O88623 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.1■□□□□ 0.49
Usp2O88623 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.1■□□□□ 0.49
Usp2O88623 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Usp2O88623 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp2O88623 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp2O88623 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp2O88623 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Usp2O88623 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp2O88623 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp2O88623 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp2O88623 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp2O88623 Grk6-206ENSMUST00000224995 2971 ntBASIC18.09■□□□□ 0.49
Usp2O88623 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp2O88623 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp2O88623 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp2O88623 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp2O88623 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Usp2O88623 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.09■□□□□ 0.49
Usp2O88623 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Usp2O88623 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp2O88623 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Usp2O88623 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp2O88623 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp2O88623 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Usp2O88623 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.09■□□□□ 0.49
Usp2O88623 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.09■□□□□ 0.49
Usp2O88623 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp2O88623 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp2O88623 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.09■□□□□ 0.49
Usp2O88623 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Usp2O88623 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp2O88623 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
Usp2O88623 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp2O88623 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms