Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lrif1Q8CDD9 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.67■□□□□ 0.42
Lrif1Q8CDD9 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Lrif1Q8CDD9 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Lrif1Q8CDD9 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lrif1Q8CDD9 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Lrif1Q8CDD9 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.67■□□□□ 0.42
Lrif1Q8CDD9 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Lrif1Q8CDD9 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.67■□□□□ 0.42
Lrif1Q8CDD9 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lrif1Q8CDD9 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lrif1Q8CDD9 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lrif1Q8CDD9 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lrif1Q8CDD9 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lrif1Q8CDD9 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lrif1Q8CDD9 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lrif1Q8CDD9 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Lrif1Q8CDD9 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lrif1Q8CDD9 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lrif1Q8CDD9 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lrif1Q8CDD9 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lrif1Q8CDD9 Gm13234-201ENSMUST00000120010 747 ntBASIC17.66■□□□□ 0.42
Lrif1Q8CDD9 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Lrif1Q8CDD9 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Lrif1Q8CDD9 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.66■□□□□ 0.42
Lrif1Q8CDD9 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.66■□□□□ 0.42
Lrif1Q8CDD9 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Lrif1Q8CDD9 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lrif1Q8CDD9 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.66■□□□□ 0.42
Lrif1Q8CDD9 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Lrif1Q8CDD9 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lrif1Q8CDD9 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lrif1Q8CDD9 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Lrif1Q8CDD9 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lrif1Q8CDD9 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Lrif1Q8CDD9 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lrif1Q8CDD9 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lrif1Q8CDD9 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lrif1Q8CDD9 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lrif1Q8CDD9 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lrif1Q8CDD9 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.65■□□□□ 0.42
Lrif1Q8CDD9 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.65■□□□□ 0.42
Lrif1Q8CDD9 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lrif1Q8CDD9 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lrif1Q8CDD9 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
Lrif1Q8CDD9 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Lrif1Q8CDD9 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lrif1Q8CDD9 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.64■□□□□ 0.41
Lrif1Q8CDD9 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lrif1Q8CDD9 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lrif1Q8CDD9 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Lrif1Q8CDD9 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lrif1Q8CDD9 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lrif1Q8CDD9 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.64■□□□□ 0.41
Lrif1Q8CDD9 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.64■□□□□ 0.41
Lrif1Q8CDD9 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.64■□□□□ 0.41
Lrif1Q8CDD9 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lrif1Q8CDD9 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Lrif1Q8CDD9 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Lrif1Q8CDD9 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Lrif1Q8CDD9 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lrif1Q8CDD9 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lrif1Q8CDD9 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Lrif1Q8CDD9 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lrif1Q8CDD9 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lrif1Q8CDD9 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.63■□□□□ 0.41
Lrif1Q8CDD9 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lrif1Q8CDD9 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.63■□□□□ 0.41
Lrif1Q8CDD9 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Lrif1Q8CDD9 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lrif1Q8CDD9 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lrif1Q8CDD9 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Lrif1Q8CDD9 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lrif1Q8CDD9 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lrif1Q8CDD9 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lrif1Q8CDD9 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.62■□□□□ 0.41
Lrif1Q8CDD9 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lrif1Q8CDD9 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lrif1Q8CDD9 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lrif1Q8CDD9 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lrif1Q8CDD9 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lrif1Q8CDD9 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lrif1Q8CDD9 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Lrif1Q8CDD9 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Lrif1Q8CDD9 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.62■□□□□ 0.41
Lrif1Q8CDD9 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lrif1Q8CDD9 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Lrif1Q8CDD9 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Lrif1Q8CDD9 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.62■□□□□ 0.41
Lrif1Q8CDD9 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.62■□□□□ 0.41
Lrif1Q8CDD9 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lrif1Q8CDD9 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lrif1Q8CDD9 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lrif1Q8CDD9 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.62■□□□□ 0.41
Lrif1Q8CDD9 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Lrif1Q8CDD9 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lrif1Q8CDD9 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lrif1Q8CDD9 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lrif1Q8CDD9 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lrif1Q8CDD9 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 95.6 ms