Protein–RNA interactions for Protein: Q64131

Runx3, Runt-related transcription factor 3, mousemouse

Predictions only

Length 409 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Runx3Q64131 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Runx3Q64131 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.17■□□□□ 0.5
Runx3Q64131 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.17■□□□□ 0.5
Runx3Q64131 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Runx3Q64131 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.17■□□□□ 0.5
Runx3Q64131 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Runx3Q64131 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Runx3Q64131 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Runx3Q64131 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Runx3Q64131 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Runx3Q64131 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Runx3Q64131 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Runx3Q64131 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Runx3Q64131 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Runx3Q64131 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Runx3Q64131 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Runx3Q64131 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Runx3Q64131 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.16■□□□□ 0.5
Runx3Q64131 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Runx3Q64131 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Runx3Q64131 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC18.15■□□□□ 0.5
Runx3Q64131 Gm45058-201ENSMUST00000205810 766 ntBASIC18.15■□□□□ 0.5
Runx3Q64131 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Runx3Q64131 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Runx3Q64131 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Runx3Q64131 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
Runx3Q64131 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Runx3Q64131 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Runx3Q64131 Gm10418-201ENSMUST00000100943 576 ntBASIC18.14■□□□□ 0.49
Runx3Q64131 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC18.14■□□□□ 0.49
Runx3Q64131 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Runx3Q64131 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC18.14■□□□□ 0.49
Runx3Q64131 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Runx3Q64131 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Runx3Q64131 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Runx3Q64131 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.14■□□□□ 0.49
Runx3Q64131 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Runx3Q64131 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Runx3Q64131 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Runx3Q64131 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Runx3Q64131 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Runx3Q64131 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Runx3Q64131 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Runx3Q64131 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Runx3Q64131 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Runx3Q64131 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Runx3Q64131 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Runx3Q64131 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.13■□□□□ 0.49
Runx3Q64131 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Runx3Q64131 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Runx3Q64131 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Runx3Q64131 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.12■□□□□ 0.49
Runx3Q64131 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.12■□□□□ 0.49
Runx3Q64131 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Runx3Q64131 Gm13401-201ENSMUST00000117074 291 ntBASIC18.12■□□□□ 0.49
Runx3Q64131 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Runx3Q64131 Gm2274-201ENSMUST00000184539 609 ntBASIC18.12■□□□□ 0.49
Runx3Q64131 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
Runx3Q64131 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Runx3Q64131 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Runx3Q64131 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18.12■□□□□ 0.49
Runx3Q64131 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Runx3Q64131 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Runx3Q64131 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.12■□□□□ 0.49
Runx3Q64131 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Runx3Q64131 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Runx3Q64131 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Runx3Q64131 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.12■□□□□ 0.49
Runx3Q64131 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Runx3Q64131 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Runx3Q64131 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Runx3Q64131 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.11■□□□□ 0.49
Runx3Q64131 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC18.11■□□□□ 0.49
Runx3Q64131 Gm18032-201ENSMUST00000222541 538 ntBASIC18.11■□□□□ 0.49
Runx3Q64131 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Runx3Q64131 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.11■□□□□ 0.49
Runx3Q64131 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Runx3Q64131 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Runx3Q64131 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Runx3Q64131 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Runx3Q64131 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.1■□□□□ 0.49
Runx3Q64131 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Runx3Q64131 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Runx3Q64131 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Runx3Q64131 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Runx3Q64131 Mir5130-201ENSMUST00000175160 84 ntBASIC18.1■□□□□ 0.49
Runx3Q64131 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
Runx3Q64131 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Runx3Q64131 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Runx3Q64131 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Runx3Q64131 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Runx3Q64131 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Runx3Q64131 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Runx3Q64131 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Runx3Q64131 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Runx3Q64131 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Runx3Q64131 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Runx3Q64131 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Runx3Q64131 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Runx3Q64131 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms