Protein–RNA interactions for Protein: Q9JL35

Hmgn5, High mobility group nucleosome-binding domain-containing protein 5, mousemouse

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn5Q9JL35 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Hmgn5Q9JL35 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hmgn5Q9JL35 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Hmgn5Q9JL35 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hmgn5Q9JL35 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hmgn5Q9JL35 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hmgn5Q9JL35 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Hmgn5Q9JL35 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Hmgn5Q9JL35 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hmgn5Q9JL35 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hmgn5Q9JL35 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC20.22■□□□□ 0.83
Hmgn5Q9JL35 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hmgn5Q9JL35 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Hmgn5Q9JL35 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hmgn5Q9JL35 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Hmgn5Q9JL35 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Hmgn5Q9JL35 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Hmgn5Q9JL35 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Hmgn5Q9JL35 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Hmgn5Q9JL35 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.21■□□□□ 0.83
Hmgn5Q9JL35 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Hmgn5Q9JL35 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Hmgn5Q9JL35 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Hmgn5Q9JL35 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hmgn5Q9JL35 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Hmgn5Q9JL35 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hmgn5Q9JL35 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Hmgn5Q9JL35 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hmgn5Q9JL35 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Hmgn5Q9JL35 Gm14117-201ENSMUST00000122417 843 ntBASIC20.2■□□□□ 0.82
Hmgn5Q9JL35 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Hmgn5Q9JL35 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.2■□□□□ 0.82
Hmgn5Q9JL35 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hmgn5Q9JL35 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hmgn5Q9JL35 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hmgn5Q9JL35 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Hmgn5Q9JL35 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hmgn5Q9JL35 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Hmgn5Q9JL35 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC20.19■□□□□ 0.82
Hmgn5Q9JL35 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Hmgn5Q9JL35 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Hmgn5Q9JL35 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hmgn5Q9JL35 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hmgn5Q9JL35 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hmgn5Q9JL35 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hmgn5Q9JL35 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.19■□□□□ 0.82
Hmgn5Q9JL35 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Hmgn5Q9JL35 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hmgn5Q9JL35 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hmgn5Q9JL35 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hmgn5Q9JL35 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Hmgn5Q9JL35 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hmgn5Q9JL35 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hmgn5Q9JL35 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hmgn5Q9JL35 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hmgn5Q9JL35 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hmgn5Q9JL35 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.18■□□□□ 0.82
Hmgn5Q9JL35 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hmgn5Q9JL35 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hmgn5Q9JL35 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hmgn5Q9JL35 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Hmgn5Q9JL35 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hmgn5Q9JL35 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hmgn5Q9JL35 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hmgn5Q9JL35 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hmgn5Q9JL35 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hmgn5Q9JL35 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hmgn5Q9JL35 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hmgn5Q9JL35 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Hmgn5Q9JL35 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Hmgn5Q9JL35 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hmgn5Q9JL35 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hmgn5Q9JL35 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hmgn5Q9JL35 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hmgn5Q9JL35 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Hmgn5Q9JL35 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hmgn5Q9JL35 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC20.17■□□□□ 0.82
Hmgn5Q9JL35 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Hmgn5Q9JL35 Rps24-207ENSMUST00000224568 714 ntBASIC20.17■□□□□ 0.82
Hmgn5Q9JL35 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hmgn5Q9JL35 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hmgn5Q9JL35 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC20.17■□□□□ 0.82
Hmgn5Q9JL35 Gm7292-201ENSMUST00000194706 2527 ntBASIC20.17■□□□□ 0.82
Hmgn5Q9JL35 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hmgn5Q9JL35 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hmgn5Q9JL35 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hmgn5Q9JL35 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hmgn5Q9JL35 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hmgn5Q9JL35 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hmgn5Q9JL35 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hmgn5Q9JL35 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Hmgn5Q9JL35 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Hmgn5Q9JL35 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hmgn5Q9JL35 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.16■□□□□ 0.82
Hmgn5Q9JL35 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hmgn5Q9JL35 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hmgn5Q9JL35 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hmgn5Q9JL35 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Hmgn5Q9JL35 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hmgn5Q9JL35 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms