Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
Trim43aQ3TL54 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim43aQ3TL54 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim43aQ3TL54 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim43aQ3TL54 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Trim43aQ3TL54 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim43aQ3TL54 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim43aQ3TL54 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim43aQ3TL54 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Trim43aQ3TL54 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim43aQ3TL54 Gm43548-201ENSMUST00000197139 2353 ntBASIC19.03■□□□□ 0.64
Trim43aQ3TL54 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim43aQ3TL54 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim43aQ3TL54 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trim43aQ3TL54 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim43aQ3TL54 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.03■□□□□ 0.64
Trim43aQ3TL54 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
Trim43aQ3TL54 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trim43aQ3TL54 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim43aQ3TL54 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.03■□□□□ 0.64
Trim43aQ3TL54 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trim43aQ3TL54 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.03■□□□□ 0.64
Trim43aQ3TL54 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim43aQ3TL54 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim43aQ3TL54 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.02■□□□□ 0.64
Trim43aQ3TL54 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Trim43aQ3TL54 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim43aQ3TL54 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim43aQ3TL54 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trim43aQ3TL54 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim43aQ3TL54 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim43aQ3TL54 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim43aQ3TL54 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim43aQ3TL54 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trim43aQ3TL54 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim43aQ3TL54 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.02■□□□□ 0.64
Trim43aQ3TL54 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim43aQ3TL54 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim43aQ3TL54 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.02■□□□□ 0.64
Trim43aQ3TL54 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim43aQ3TL54 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Trim43aQ3TL54 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Trim43aQ3TL54 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim43aQ3TL54 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim43aQ3TL54 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.01■□□□□ 0.63
Trim43aQ3TL54 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
Trim43aQ3TL54 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC19.01■□□□□ 0.63
Trim43aQ3TL54 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Trim43aQ3TL54 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim43aQ3TL54 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim43aQ3TL54 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.01■□□□□ 0.63
Trim43aQ3TL54 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.01■□□□□ 0.63
Trim43aQ3TL54 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.01■□□□□ 0.63
Trim43aQ3TL54 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim43aQ3TL54 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Trim43aQ3TL54 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim43aQ3TL54 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
Trim43aQ3TL54 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim43aQ3TL54 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Trim43aQ3TL54 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim43aQ3TL54 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim43aQ3TL54 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trim43aQ3TL54 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Trim43aQ3TL54 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim43aQ3TL54 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trim43aQ3TL54 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim43aQ3TL54 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Trim43aQ3TL54 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trim43aQ3TL54 Gm13146-201ENSMUST00000118508 780 ntBASIC19■□□□□ 0.63
Trim43aQ3TL54 AC099934.2-201ENSMUST00000196389 70 ntBASIC19■□□□□ 0.63
Trim43aQ3TL54 AC156953.1-201ENSMUST00000196953 70 ntBASIC19■□□□□ 0.63
Trim43aQ3TL54 AC157822.2-201ENSMUST00000200291 70 ntBASIC19■□□□□ 0.63
Trim43aQ3TL54 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim43aQ3TL54 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Trim43aQ3TL54 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim43aQ3TL54 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Trim43aQ3TL54 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trim43aQ3TL54 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim43aQ3TL54 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Trim43aQ3TL54 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim43aQ3TL54 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trim43aQ3TL54 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trim43aQ3TL54 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim43aQ3TL54 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trim43aQ3TL54 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim43aQ3TL54 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Trim43aQ3TL54 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim43aQ3TL54 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.99■□□□□ 0.63
Trim43aQ3TL54 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim43aQ3TL54 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim43aQ3TL54 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Trim43aQ3TL54 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trim43aQ3TL54 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim43aQ3TL54 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.98■□□□□ 0.63
Trim43aQ3TL54 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.98■□□□□ 0.63
Trim43aQ3TL54 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim43aQ3TL54 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim43aQ3TL54 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim43aQ3TL54 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim43aQ3TL54 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms