Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Uspl1Q3ULM6 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
Uspl1Q3ULM6 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Uspl1Q3ULM6 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC23.32■■□□□ 1.32
Uspl1Q3ULM6 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Uspl1Q3ULM6 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
Uspl1Q3ULM6 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Uspl1Q3ULM6 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Uspl1Q3ULM6 Idnk-204ENSMUST00000226010 1898 ntBASIC23.32■■□□□ 1.32
Uspl1Q3ULM6 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC23.32■■□□□ 1.32
Uspl1Q3ULM6 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
Uspl1Q3ULM6 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Uspl1Q3ULM6 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Uspl1Q3ULM6 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
Uspl1Q3ULM6 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC23.31■■□□□ 1.32
Uspl1Q3ULM6 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Uspl1Q3ULM6 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
Uspl1Q3ULM6 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC23.31■■□□□ 1.32
Uspl1Q3ULM6 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC23.31■■□□□ 1.32
Uspl1Q3ULM6 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC23.31■■□□□ 1.32
Uspl1Q3ULM6 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Uspl1Q3ULM6 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC23.31■■□□□ 1.32
Uspl1Q3ULM6 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
Uspl1Q3ULM6 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
Uspl1Q3ULM6 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Uspl1Q3ULM6 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Uspl1Q3ULM6 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
Uspl1Q3ULM6 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Uspl1Q3ULM6 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC23.3■■□□□ 1.32
Uspl1Q3ULM6 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Uspl1Q3ULM6 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Uspl1Q3ULM6 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Uspl1Q3ULM6 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Uspl1Q3ULM6 H2-K2-201ENSMUST00000174250 1049 ntBASIC23.3■■□□□ 1.32
Uspl1Q3ULM6 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC23.3■■□□□ 1.32
Uspl1Q3ULM6 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC23.3■■□□□ 1.32
Uspl1Q3ULM6 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Uspl1Q3ULM6 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
Uspl1Q3ULM6 Nrn1-203ENSMUST00000223611 1443 ntBASIC23.3■■□□□ 1.32
Uspl1Q3ULM6 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Uspl1Q3ULM6 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Uspl1Q3ULM6 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC23.3■■□□□ 1.32
Uspl1Q3ULM6 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Uspl1Q3ULM6 Gm43182-201ENSMUST00000199476 2528 ntBASIC23.29■■□□□ 1.32
Uspl1Q3ULM6 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC23.29■■□□□ 1.32
Uspl1Q3ULM6 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
Uspl1Q3ULM6 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Uspl1Q3ULM6 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC23.29■■□□□ 1.32
Uspl1Q3ULM6 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Uspl1Q3ULM6 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
Uspl1Q3ULM6 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Uspl1Q3ULM6 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Uspl1Q3ULM6 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Uspl1Q3ULM6 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Uspl1Q3ULM6 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
Uspl1Q3ULM6 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Uspl1Q3ULM6 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Uspl1Q3ULM6 Gm10698-201ENSMUST00000182663 604 ntBASIC23.28■■□□□ 1.32
Uspl1Q3ULM6 Gm29241-201ENSMUST00000189260 1096 ntBASIC23.28■■□□□ 1.32
Uspl1Q3ULM6 Gm18666-201ENSMUST00000190039 958 ntBASIC23.28■■□□□ 1.32
Uspl1Q3ULM6 Gm37820-201ENSMUST00000194021 2147 ntBASIC23.28■■□□□ 1.32
Uspl1Q3ULM6 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Uspl1Q3ULM6 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Uspl1Q3ULM6 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Uspl1Q3ULM6 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Uspl1Q3ULM6 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
Uspl1Q3ULM6 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Uspl1Q3ULM6 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Uspl1Q3ULM6 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Uspl1Q3ULM6 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Uspl1Q3ULM6 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Uspl1Q3ULM6 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Uspl1Q3ULM6 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Uspl1Q3ULM6 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC23.27■■□□□ 1.32
Uspl1Q3ULM6 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Uspl1Q3ULM6 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC23.27■■□□□ 1.32
Uspl1Q3ULM6 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC23.27■■□□□ 1.32
Uspl1Q3ULM6 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Uspl1Q3ULM6 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Uspl1Q3ULM6 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Uspl1Q3ULM6 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Uspl1Q3ULM6 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Uspl1Q3ULM6 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Uspl1Q3ULM6 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
Uspl1Q3ULM6 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
Uspl1Q3ULM6 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
Uspl1Q3ULM6 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Uspl1Q3ULM6 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Uspl1Q3ULM6 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC23.26■■□□□ 1.31
Uspl1Q3ULM6 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Uspl1Q3ULM6 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Uspl1Q3ULM6 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Uspl1Q3ULM6 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Uspl1Q3ULM6 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC23.25■■□□□ 1.31
Uspl1Q3ULM6 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
Uspl1Q3ULM6 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Uspl1Q3ULM6 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Uspl1Q3ULM6 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Uspl1Q3ULM6 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Uspl1Q3ULM6 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms