Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.1■□□□□ 0.65
Trim43aQ3TL54 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trim43aQ3TL54 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim43aQ3TL54 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim43aQ3TL54 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC19.1■□□□□ 0.65
Trim43aQ3TL54 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Trim43aQ3TL54 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim43aQ3TL54 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim43aQ3TL54 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim43aQ3TL54 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim43aQ3TL54 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trim43aQ3TL54 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.09■□□□□ 0.65
Trim43aQ3TL54 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.09■□□□□ 0.65
Trim43aQ3TL54 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim43aQ3TL54 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trim43aQ3TL54 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim43aQ3TL54 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim43aQ3TL54 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.09■□□□□ 0.65
Trim43aQ3TL54 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.09■□□□□ 0.65
Trim43aQ3TL54 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Trim43aQ3TL54 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.09■□□□□ 0.65
Trim43aQ3TL54 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim43aQ3TL54 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.09■□□□□ 0.65
Trim43aQ3TL54 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
Trim43aQ3TL54 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim43aQ3TL54 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim43aQ3TL54 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim43aQ3TL54 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Trim43aQ3TL54 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Trim43aQ3TL54 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim43aQ3TL54 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Trim43aQ3TL54 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Trim43aQ3TL54 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim43aQ3TL54 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim43aQ3TL54 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.08■□□□□ 0.64
Trim43aQ3TL54 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.08■□□□□ 0.64
Trim43aQ3TL54 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim43aQ3TL54 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim43aQ3TL54 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim43aQ3TL54 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim43aQ3TL54 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.08■□□□□ 0.64
Trim43aQ3TL54 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Trim43aQ3TL54 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim43aQ3TL54 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim43aQ3TL54 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trim43aQ3TL54 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Trim43aQ3TL54 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim43aQ3TL54 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim43aQ3TL54 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim43aQ3TL54 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Trim43aQ3TL54 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim43aQ3TL54 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim43aQ3TL54 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trim43aQ3TL54 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim43aQ3TL54 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim43aQ3TL54 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim43aQ3TL54 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim43aQ3TL54 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trim43aQ3TL54 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim43aQ3TL54 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Trim43aQ3TL54 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim43aQ3TL54 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim43aQ3TL54 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trim43aQ3TL54 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim43aQ3TL54 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
Trim43aQ3TL54 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
Trim43aQ3TL54 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim43aQ3TL54 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Trim43aQ3TL54 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim43aQ3TL54 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
Trim43aQ3TL54 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.06■□□□□ 0.64
Trim43aQ3TL54 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
Trim43aQ3TL54 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trim43aQ3TL54 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim43aQ3TL54 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
Trim43aQ3TL54 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim43aQ3TL54 Gm43294-201ENSMUST00000202850 2490 ntBASIC19.05■□□□□ 0.64
Trim43aQ3TL54 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.05■□□□□ 0.64
Trim43aQ3TL54 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Trim43aQ3TL54 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Trim43aQ3TL54 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim43aQ3TL54 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Trim43aQ3TL54 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trim43aQ3TL54 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim43aQ3TL54 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim43aQ3TL54 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Trim43aQ3TL54 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim43aQ3TL54 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim43aQ3TL54 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim43aQ3TL54 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim43aQ3TL54 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim43aQ3TL54 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Trim43aQ3TL54 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim43aQ3TL54 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim43aQ3TL54 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim43aQ3TL54 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Trim43aQ3TL54 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.04■□□□□ 0.64
Trim43aQ3TL54 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim43aQ3TL54 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim43aQ3TL54 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms