Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.39■□□□□ 0.21
H2afb1S4R1E0 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
H2afb1S4R1E0 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.39■□□□□ 0.21
H2afb1S4R1E0 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC16.39■□□□□ 0.21
H2afb1S4R1E0 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
H2afb1S4R1E0 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
H2afb1S4R1E0 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
H2afb1S4R1E0 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
H2afb1S4R1E0 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
H2afb1S4R1E0 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
H2afb1S4R1E0 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
H2afb1S4R1E0 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
H2afb1S4R1E0 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
H2afb1S4R1E0 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
H2afb1S4R1E0 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
H2afb1S4R1E0 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
H2afb1S4R1E0 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
H2afb1S4R1E0 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
H2afb1S4R1E0 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC16.38■□□□□ 0.21
H2afb1S4R1E0 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
H2afb1S4R1E0 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
H2afb1S4R1E0 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
H2afb1S4R1E0 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
H2afb1S4R1E0 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
H2afb1S4R1E0 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
H2afb1S4R1E0 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
H2afb1S4R1E0 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
H2afb1S4R1E0 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
H2afb1S4R1E0 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
H2afb1S4R1E0 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.37■□□□□ 0.21
H2afb1S4R1E0 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
H2afb1S4R1E0 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
H2afb1S4R1E0 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
H2afb1S4R1E0 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
H2afb1S4R1E0 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.37■□□□□ 0.21
H2afb1S4R1E0 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.37■□□□□ 0.21
H2afb1S4R1E0 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.37■□□□□ 0.21
H2afb1S4R1E0 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
H2afb1S4R1E0 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
H2afb1S4R1E0 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
H2afb1S4R1E0 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
H2afb1S4R1E0 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
H2afb1S4R1E0 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
H2afb1S4R1E0 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
H2afb1S4R1E0 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
H2afb1S4R1E0 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
H2afb1S4R1E0 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
H2afb1S4R1E0 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
H2afb1S4R1E0 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
H2afb1S4R1E0 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
H2afb1S4R1E0 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
H2afb1S4R1E0 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
H2afb1S4R1E0 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
H2afb1S4R1E0 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
H2afb1S4R1E0 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
H2afb1S4R1E0 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
H2afb1S4R1E0 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.36■□□□□ 0.21
H2afb1S4R1E0 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
H2afb1S4R1E0 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
H2afb1S4R1E0 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
H2afb1S4R1E0 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
H2afb1S4R1E0 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
H2afb1S4R1E0 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
H2afb1S4R1E0 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
H2afb1S4R1E0 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
H2afb1S4R1E0 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.36■□□□□ 0.21
H2afb1S4R1E0 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
H2afb1S4R1E0 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
H2afb1S4R1E0 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.35■□□□□ 0.21
H2afb1S4R1E0 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.35■□□□□ 0.21
H2afb1S4R1E0 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.35■□□□□ 0.21
H2afb1S4R1E0 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
H2afb1S4R1E0 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.35■□□□□ 0.21
H2afb1S4R1E0 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
H2afb1S4R1E0 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.35■□□□□ 0.21
H2afb1S4R1E0 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.35■□□□□ 0.21
H2afb1S4R1E0 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
H2afb1S4R1E0 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
H2afb1S4R1E0 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
H2afb1S4R1E0 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
H2afb1S4R1E0 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
H2afb1S4R1E0 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
H2afb1S4R1E0 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
H2afb1S4R1E0 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
H2afb1S4R1E0 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
H2afb1S4R1E0 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
H2afb1S4R1E0 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.34■□□□□ 0.21
H2afb1S4R1E0 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC16.34■□□□□ 0.21
H2afb1S4R1E0 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC16.34■□□□□ 0.21
H2afb1S4R1E0 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
H2afb1S4R1E0 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
H2afb1S4R1E0 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.34■□□□□ 0.21
H2afb1S4R1E0 Reep4-203ENSMUST00000226563 1444 ntBASIC16.34■□□□□ 0.21
H2afb1S4R1E0 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.34■□□□□ 0.21
H2afb1S4R1E0 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
H2afb1S4R1E0 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
H2afb1S4R1E0 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
H2afb1S4R1E0 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
H2afb1S4R1E0 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
H2afb1S4R1E0 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms