Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Shroom1Q5SX79 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shroom1Q5SX79 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Shroom1Q5SX79 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.2■□□□□ 0.66
Shroom1Q5SX79 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Shroom1Q5SX79 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Shroom1Q5SX79 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shroom1Q5SX79 Zfp783-201ENSMUST00000095946 670 ntBASIC19.2■□□□□ 0.66
Shroom1Q5SX79 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Shroom1Q5SX79 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shroom1Q5SX79 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Shroom1Q5SX79 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Shroom1Q5SX79 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Shroom1Q5SX79 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Shroom1Q5SX79 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Shroom1Q5SX79 Gm7977-201ENSMUST00000193787 748 ntBASIC19.19■□□□□ 0.66
Shroom1Q5SX79 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Shroom1Q5SX79 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Shroom1Q5SX79 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Shroom1Q5SX79 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.19■□□□□ 0.66
Shroom1Q5SX79 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Shroom1Q5SX79 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Shroom1Q5SX79 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Shroom1Q5SX79 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
Shroom1Q5SX79 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Shroom1Q5SX79 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Shroom1Q5SX79 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Shroom1Q5SX79 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Shroom1Q5SX79 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Shroom1Q5SX79 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.18■□□□□ 0.66
Shroom1Q5SX79 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Shroom1Q5SX79 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC19.18■□□□□ 0.66
Shroom1Q5SX79 Gm13836-201ENSMUST00000121159 501 ntBASIC19.18■□□□□ 0.66
Shroom1Q5SX79 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Shroom1Q5SX79 Gm37055-201ENSMUST00000191866 133 ntBASIC19.18■□□□□ 0.66
Shroom1Q5SX79 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Shroom1Q5SX79 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.18■□□□□ 0.66
Shroom1Q5SX79 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Shroom1Q5SX79 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Shroom1Q5SX79 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Shroom1Q5SX79 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Shroom1Q5SX79 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.18■□□□□ 0.66
Shroom1Q5SX79 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Shroom1Q5SX79 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Shroom1Q5SX79 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Shroom1Q5SX79 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Shroom1Q5SX79 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Shroom1Q5SX79 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Shroom1Q5SX79 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.17■□□□□ 0.66
Shroom1Q5SX79 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Shroom1Q5SX79 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Shroom1Q5SX79 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.17■□□□□ 0.66
Shroom1Q5SX79 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Shroom1Q5SX79 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Shroom1Q5SX79 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.17■□□□□ 0.66
Shroom1Q5SX79 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Shroom1Q5SX79 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.17■□□□□ 0.66
Shroom1Q5SX79 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Shroom1Q5SX79 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Shroom1Q5SX79 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Shroom1Q5SX79 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Shroom1Q5SX79 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Shroom1Q5SX79 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Shroom1Q5SX79 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Shroom1Q5SX79 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.16■□□□□ 0.66
Shroom1Q5SX79 Gm9484-201ENSMUST00000195892 1159 ntBASIC19.16■□□□□ 0.66
Shroom1Q5SX79 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.16■□□□□ 0.66
Shroom1Q5SX79 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Shroom1Q5SX79 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.16■□□□□ 0.66
Shroom1Q5SX79 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Shroom1Q5SX79 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Shroom1Q5SX79 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Shroom1Q5SX79 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Shroom1Q5SX79 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Shroom1Q5SX79 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.15■□□□□ 0.66
Shroom1Q5SX79 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Shroom1Q5SX79 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Shroom1Q5SX79 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Shroom1Q5SX79 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC19.15■□□□□ 0.66
Shroom1Q5SX79 Krtap5-1-202ENSMUST00000188274 742 ntBASIC19.15■□□□□ 0.66
Shroom1Q5SX79 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.15■□□□□ 0.66
Shroom1Q5SX79 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Shroom1Q5SX79 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Shroom1Q5SX79 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Shroom1Q5SX79 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Shroom1Q5SX79 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Shroom1Q5SX79 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Shroom1Q5SX79 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Shroom1Q5SX79 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Shroom1Q5SX79 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Shroom1Q5SX79 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC19.14■□□□□ 0.65
Shroom1Q5SX79 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Shroom1Q5SX79 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Shroom1Q5SX79 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Shroom1Q5SX79 Gm10138-203ENSMUST00000206952 366 ntBASIC19.14■□□□□ 0.65
Shroom1Q5SX79 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.14■□□□□ 0.65
Shroom1Q5SX79 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Shroom1Q5SX79 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Shroom1Q5SX79 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Shroom1Q5SX79 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms