Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
Uspl1Q3ULM6 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Uspl1Q3ULM6 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Uspl1Q3ULM6 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC23.41■■□□□ 1.34
Uspl1Q3ULM6 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Uspl1Q3ULM6 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC23.41■■□□□ 1.34
Uspl1Q3ULM6 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Uspl1Q3ULM6 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Uspl1Q3ULM6 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Uspl1Q3ULM6 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC23.4■■□□□ 1.34
Uspl1Q3ULM6 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Uspl1Q3ULM6 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC23.4■■□□□ 1.34
Uspl1Q3ULM6 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Uspl1Q3ULM6 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Uspl1Q3ULM6 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Uspl1Q3ULM6 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Uspl1Q3ULM6 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Uspl1Q3ULM6 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC23.4■■□□□ 1.34
Uspl1Q3ULM6 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC23.4■■□□□ 1.34
Uspl1Q3ULM6 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Uspl1Q3ULM6 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Uspl1Q3ULM6 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.34
Uspl1Q3ULM6 Gm5643-201ENSMUST00000117081 966 ntBASIC23.39■■□□□ 1.33
Uspl1Q3ULM6 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Uspl1Q3ULM6 Gm10138-203ENSMUST00000206952 366 ntBASIC23.39■■□□□ 1.33
Uspl1Q3ULM6 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Uspl1Q3ULM6 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
Uspl1Q3ULM6 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Uspl1Q3ULM6 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Uspl1Q3ULM6 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Uspl1Q3ULM6 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Uspl1Q3ULM6 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Uspl1Q3ULM6 Gm13158-201ENSMUST00000122007 736 ntBASIC23.38■■□□□ 1.33
Uspl1Q3ULM6 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC23.38■■□□□ 1.33
Uspl1Q3ULM6 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC23.38■■□□□ 1.33
Uspl1Q3ULM6 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Uspl1Q3ULM6 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
Uspl1Q3ULM6 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Uspl1Q3ULM6 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Uspl1Q3ULM6 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Uspl1Q3ULM6 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Uspl1Q3ULM6 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Uspl1Q3ULM6 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Uspl1Q3ULM6 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Uspl1Q3ULM6 Gm10654-201ENSMUST00000098653 1633 ntBASIC23.37■■□□□ 1.33
Uspl1Q3ULM6 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Uspl1Q3ULM6 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Uspl1Q3ULM6 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC23.37■■□□□ 1.33
Uspl1Q3ULM6 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Uspl1Q3ULM6 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
Uspl1Q3ULM6 Gm42939-201ENSMUST00000197514 2205 ntBASIC23.37■■□□□ 1.33
Uspl1Q3ULM6 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Uspl1Q3ULM6 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Uspl1Q3ULM6 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
Uspl1Q3ULM6 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Uspl1Q3ULM6 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Uspl1Q3ULM6 Gm20760-201ENSMUST00000179197 648 ntBASIC23.36■■□□□ 1.33
Uspl1Q3ULM6 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC23.36■■□□□ 1.33
Uspl1Q3ULM6 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Uspl1Q3ULM6 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
Uspl1Q3ULM6 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Uspl1Q3ULM6 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
Uspl1Q3ULM6 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Uspl1Q3ULM6 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
Uspl1Q3ULM6 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
Uspl1Q3ULM6 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC23.35■■□□□ 1.33
Uspl1Q3ULM6 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Uspl1Q3ULM6 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Uspl1Q3ULM6 Gm45560-201ENSMUST00000211492 1472 ntBASIC23.35■■□□□ 1.33
Uspl1Q3ULM6 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Uspl1Q3ULM6 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Uspl1Q3ULM6 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Uspl1Q3ULM6 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Uspl1Q3ULM6 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC23.34■■□□□ 1.33
Uspl1Q3ULM6 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Uspl1Q3ULM6 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
Uspl1Q3ULM6 Gm15375-201ENSMUST00000119510 849 ntBASIC23.34■■□□□ 1.33
Uspl1Q3ULM6 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Uspl1Q3ULM6 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
Uspl1Q3ULM6 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC23.34■■□□□ 1.33
Uspl1Q3ULM6 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC23.34■■□□□ 1.33
Uspl1Q3ULM6 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC23.34■■□□□ 1.33
Uspl1Q3ULM6 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Uspl1Q3ULM6 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Uspl1Q3ULM6 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Uspl1Q3ULM6 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Uspl1Q3ULM6 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Uspl1Q3ULM6 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC23.33■■□□□ 1.33
Uspl1Q3ULM6 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Uspl1Q3ULM6 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Uspl1Q3ULM6 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Uspl1Q3ULM6 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Uspl1Q3ULM6 AC108858.1-201ENSMUST00000228461 1498 ntBASIC23.33■■□□□ 1.33
Uspl1Q3ULM6 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Uspl1Q3ULM6 Mir6349-201ENSMUST00000184059 97 ntBASIC23.33■■□□□ 1.33
Uspl1Q3ULM6 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC23.33■■□□□ 1.32
Uspl1Q3ULM6 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Uspl1Q3ULM6 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC23.33■■□□□ 1.32
Uspl1Q3ULM6 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC23.32■■□□□ 1.32
Uspl1Q3ULM6 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms