Protein–RNA interactions for Protein: Q61345

Foxd1, Forkhead box protein D1, mousemouse

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd1Q61345 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC20.93■□□□□ 0.94
Foxd1Q61345 AC163280.1-201ENSMUST00000228194 1100 ntBASIC20.93■□□□□ 0.94
Foxd1Q61345 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Foxd1Q61345 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Foxd1Q61345 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.93■□□□□ 0.94
Foxd1Q61345 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Foxd1Q61345 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Foxd1Q61345 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Foxd1Q61345 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
Foxd1Q61345 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.92■□□□□ 0.94
Foxd1Q61345 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Foxd1Q61345 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
Foxd1Q61345 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Foxd1Q61345 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Foxd1Q61345 Gm17807-201ENSMUST00000186869 298 ntBASIC20.92■□□□□ 0.94
Foxd1Q61345 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Foxd1Q61345 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC20.92■□□□□ 0.94
Foxd1Q61345 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Foxd1Q61345 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Foxd1Q61345 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
Foxd1Q61345 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Foxd1Q61345 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
Foxd1Q61345 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
Foxd1Q61345 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Foxd1Q61345 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Foxd1Q61345 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Foxd1Q61345 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Foxd1Q61345 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.91■□□□□ 0.94
Foxd1Q61345 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Foxd1Q61345 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC20.91■□□□□ 0.94
Foxd1Q61345 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Foxd1Q61345 Gm8784-201ENSMUST00000222096 1435 ntBASIC20.91■□□□□ 0.94
Foxd1Q61345 Timm23-208ENSMUST00000226683 750 ntBASIC20.91■□□□□ 0.94
Foxd1Q61345 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Foxd1Q61345 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Foxd1Q61345 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Foxd1Q61345 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Foxd1Q61345 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Foxd1Q61345 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Foxd1Q61345 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Foxd1Q61345 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
Foxd1Q61345 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Foxd1Q61345 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Foxd1Q61345 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Foxd1Q61345 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Foxd1Q61345 Gm18669-201ENSMUST00000216049 778 ntBASIC20.9■□□□□ 0.94
Foxd1Q61345 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Foxd1Q61345 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Foxd1Q61345 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
Foxd1Q61345 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Foxd1Q61345 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Foxd1Q61345 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Foxd1Q61345 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Foxd1Q61345 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Foxd1Q61345 Gm5186-201ENSMUST00000218781 920 ntBASIC20.89■□□□□ 0.93
Foxd1Q61345 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Foxd1Q61345 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.89■□□□□ 0.93
Foxd1Q61345 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Foxd1Q61345 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Foxd1Q61345 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Foxd1Q61345 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Foxd1Q61345 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Foxd1Q61345 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Foxd1Q61345 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Foxd1Q61345 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Foxd1Q61345 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Foxd1Q61345 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Foxd1Q61345 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Foxd1Q61345 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Foxd1Q61345 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Foxd1Q61345 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Foxd1Q61345 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Foxd1Q61345 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC20.88■□□□□ 0.93
Foxd1Q61345 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.88■□□□□ 0.93
Foxd1Q61345 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC20.88■□□□□ 0.93
Foxd1Q61345 Gm45058-201ENSMUST00000205810 766 ntBASIC20.88■□□□□ 0.93
Foxd1Q61345 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC20.88■□□□□ 0.93
Foxd1Q61345 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC20.88■□□□□ 0.93
Foxd1Q61345 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Foxd1Q61345 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Foxd1Q61345 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Foxd1Q61345 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Foxd1Q61345 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Foxd1Q61345 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Foxd1Q61345 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Foxd1Q61345 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Foxd1Q61345 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Foxd1Q61345 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.88■□□□□ 0.93
Foxd1Q61345 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Foxd1Q61345 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Foxd1Q61345 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Foxd1Q61345 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Foxd1Q61345 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Foxd1Q61345 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Foxd1Q61345 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Foxd1Q61345 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
Foxd1Q61345 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Foxd1Q61345 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Foxd1Q61345 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Foxd1Q61345 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms