Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Lrif1Q8CDD9 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Lrif1Q8CDD9 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Lrif1Q8CDD9 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Lrif1Q8CDD9 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Lrif1Q8CDD9 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lrif1Q8CDD9 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.98■□□□□ 0.47
Lrif1Q8CDD9 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.98■□□□□ 0.47
Lrif1Q8CDD9 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Lrif1Q8CDD9 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
Lrif1Q8CDD9 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Lrif1Q8CDD9 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lrif1Q8CDD9 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lrif1Q8CDD9 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lrif1Q8CDD9 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Lrif1Q8CDD9 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lrif1Q8CDD9 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lrif1Q8CDD9 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lrif1Q8CDD9 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lrif1Q8CDD9 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lrif1Q8CDD9 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lrif1Q8CDD9 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lrif1Q8CDD9 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.97■□□□□ 0.47
Lrif1Q8CDD9 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lrif1Q8CDD9 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lrif1Q8CDD9 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lrif1Q8CDD9 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lrif1Q8CDD9 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.97■□□□□ 0.47
Lrif1Q8CDD9 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lrif1Q8CDD9 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lrif1Q8CDD9 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lrif1Q8CDD9 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lrif1Q8CDD9 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Lrif1Q8CDD9 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lrif1Q8CDD9 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.96■□□□□ 0.47
Lrif1Q8CDD9 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lrif1Q8CDD9 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lrif1Q8CDD9 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lrif1Q8CDD9 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lrif1Q8CDD9 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lrif1Q8CDD9 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lrif1Q8CDD9 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lrif1Q8CDD9 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lrif1Q8CDD9 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lrif1Q8CDD9 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Lrif1Q8CDD9 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Lrif1Q8CDD9 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.95■□□□□ 0.46
Lrif1Q8CDD9 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lrif1Q8CDD9 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.95■□□□□ 0.46
Lrif1Q8CDD9 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lrif1Q8CDD9 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lrif1Q8CDD9 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lrif1Q8CDD9 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Lrif1Q8CDD9 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lrif1Q8CDD9 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Lrif1Q8CDD9 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Lrif1Q8CDD9 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lrif1Q8CDD9 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lrif1Q8CDD9 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lrif1Q8CDD9 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Lrif1Q8CDD9 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lrif1Q8CDD9 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lrif1Q8CDD9 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lrif1Q8CDD9 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lrif1Q8CDD9 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Lrif1Q8CDD9 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lrif1Q8CDD9 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lrif1Q8CDD9 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lrif1Q8CDD9 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lrif1Q8CDD9 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Lrif1Q8CDD9 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Lrif1Q8CDD9 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lrif1Q8CDD9 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.93■□□□□ 0.46
Lrif1Q8CDD9 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lrif1Q8CDD9 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lrif1Q8CDD9 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lrif1Q8CDD9 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Lrif1Q8CDD9 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.92■□□□□ 0.46
Lrif1Q8CDD9 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.92■□□□□ 0.46
Lrif1Q8CDD9 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lrif1Q8CDD9 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lrif1Q8CDD9 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Lrif1Q8CDD9 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.92■□□□□ 0.46
Lrif1Q8CDD9 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.92■□□□□ 0.46
Lrif1Q8CDD9 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.92■□□□□ 0.46
Lrif1Q8CDD9 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.92■□□□□ 0.46
Lrif1Q8CDD9 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lrif1Q8CDD9 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lrif1Q8CDD9 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Lrif1Q8CDD9 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.92■□□□□ 0.46
Lrif1Q8CDD9 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lrif1Q8CDD9 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lrif1Q8CDD9 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Lrif1Q8CDD9 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lrif1Q8CDD9 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lrif1Q8CDD9 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lrif1Q8CDD9 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Lrif1Q8CDD9 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Lrif1Q8CDD9 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lrif1Q8CDD9 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms