Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
H2afb1S4R1E0 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
H2afb1S4R1E0 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
H2afb1S4R1E0 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
H2afb1S4R1E0 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
H2afb1S4R1E0 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
H2afb1S4R1E0 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
H2afb1S4R1E0 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
H2afb1S4R1E0 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
H2afb1S4R1E0 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
H2afb1S4R1E0 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
H2afb1S4R1E0 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
H2afb1S4R1E0 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
H2afb1S4R1E0 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
H2afb1S4R1E0 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
H2afb1S4R1E0 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
H2afb1S4R1E0 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
H2afb1S4R1E0 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
H2afb1S4R1E0 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
H2afb1S4R1E0 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
H2afb1S4R1E0 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
H2afb1S4R1E0 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
H2afb1S4R1E0 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
H2afb1S4R1E0 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
H2afb1S4R1E0 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.59■□□□□ 0.25
H2afb1S4R1E0 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
H2afb1S4R1E0 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
H2afb1S4R1E0 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
H2afb1S4R1E0 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC16.59■□□□□ 0.25
H2afb1S4R1E0 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
H2afb1S4R1E0 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
H2afb1S4R1E0 Gm43017-201ENSMUST00000198296 752 ntBASIC16.59■□□□□ 0.25
H2afb1S4R1E0 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
H2afb1S4R1E0 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC16.59■□□□□ 0.25
H2afb1S4R1E0 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
H2afb1S4R1E0 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
H2afb1S4R1E0 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
H2afb1S4R1E0 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
H2afb1S4R1E0 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
H2afb1S4R1E0 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
H2afb1S4R1E0 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
H2afb1S4R1E0 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
H2afb1S4R1E0 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
H2afb1S4R1E0 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
H2afb1S4R1E0 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
H2afb1S4R1E0 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
H2afb1S4R1E0 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
H2afb1S4R1E0 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
H2afb1S4R1E0 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
H2afb1S4R1E0 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
H2afb1S4R1E0 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
H2afb1S4R1E0 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
H2afb1S4R1E0 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC16.58■□□□□ 0.24
H2afb1S4R1E0 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.58■□□□□ 0.24
H2afb1S4R1E0 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
H2afb1S4R1E0 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
H2afb1S4R1E0 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
H2afb1S4R1E0 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
H2afb1S4R1E0 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
H2afb1S4R1E0 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
H2afb1S4R1E0 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
H2afb1S4R1E0 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
H2afb1S4R1E0 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
H2afb1S4R1E0 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
H2afb1S4R1E0 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
H2afb1S4R1E0 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
H2afb1S4R1E0 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
H2afb1S4R1E0 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
H2afb1S4R1E0 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
H2afb1S4R1E0 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
H2afb1S4R1E0 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
H2afb1S4R1E0 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
H2afb1S4R1E0 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
H2afb1S4R1E0 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
H2afb1S4R1E0 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.57■□□□□ 0.24
H2afb1S4R1E0 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
H2afb1S4R1E0 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
H2afb1S4R1E0 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
H2afb1S4R1E0 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
H2afb1S4R1E0 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
H2afb1S4R1E0 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
H2afb1S4R1E0 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.57■□□□□ 0.24
H2afb1S4R1E0 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
H2afb1S4R1E0 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
H2afb1S4R1E0 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
H2afb1S4R1E0 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
H2afb1S4R1E0 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.56■□□□□ 0.24
H2afb1S4R1E0 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
H2afb1S4R1E0 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.56■□□□□ 0.24
H2afb1S4R1E0 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
H2afb1S4R1E0 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
H2afb1S4R1E0 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
H2afb1S4R1E0 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC16.56■□□□□ 0.24
H2afb1S4R1E0 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
H2afb1S4R1E0 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
H2afb1S4R1E0 Cdc34b-202ENSMUST00000188741 1252 ntBASIC16.56■□□□□ 0.24
H2afb1S4R1E0 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
H2afb1S4R1E0 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
H2afb1S4R1E0 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
H2afb1S4R1E0 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms