Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Hdac1O09106 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Hdac1O09106 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC21.94■■□□□ 1.1
Hdac1O09106 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Hdac1O09106 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC21.94■■□□□ 1.1
Hdac1O09106 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC21.94■■□□□ 1.1
Hdac1O09106 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC21.94■■□□□ 1.1
Hdac1O09106 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Hdac1O09106 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Hdac1O09106 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Hdac1O09106 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Hdac1O09106 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Hdac1O09106 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Hdac1O09106 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Hdac1O09106 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Hdac1O09106 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC21.93■■□□□ 1.1
Hdac1O09106 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Hdac1O09106 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC21.92■■□□□ 1.1
Hdac1O09106 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Hdac1O09106 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Hdac1O09106 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC21.92■■□□□ 1.1
Hdac1O09106 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC21.92■■□□□ 1.1
Hdac1O09106 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Hdac1O09106 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Hdac1O09106 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Hdac1O09106 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Hdac1O09106 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Hdac1O09106 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Hdac1O09106 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC21.91■■□□□ 1.1
Hdac1O09106 Gm12821-201ENSMUST00000120022 600 ntBASIC21.91■■□□□ 1.1
Hdac1O09106 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC21.91■■□□□ 1.1
Hdac1O09106 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC21.91■■□□□ 1.1
Hdac1O09106 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Hdac1O09106 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC21.91■■□□□ 1.1
Hdac1O09106 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Hdac1O09106 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Hdac1O09106 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Hdac1O09106 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Hdac1O09106 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Hdac1O09106 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Hdac1O09106 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Hdac1O09106 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Hdac1O09106 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Hdac1O09106 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Hdac1O09106 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Hdac1O09106 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Hdac1O09106 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Hdac1O09106 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Hdac1O09106 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC21.89■■□□□ 1.1
Hdac1O09106 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Hdac1O09106 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Hdac1O09106 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Hdac1O09106 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Hdac1O09106 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Hdac1O09106 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Hdac1O09106 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
Hdac1O09106 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Hdac1O09106 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
Hdac1O09106 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Hdac1O09106 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC21.89■■□□□ 1.09
Hdac1O09106 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Hdac1O09106 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Hdac1O09106 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Hdac1O09106 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Hdac1O09106 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Hdac1O09106 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Hdac1O09106 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Hdac1O09106 Gm13146-201ENSMUST00000118508 780 ntBASIC21.88■■□□□ 1.09
Hdac1O09106 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC21.88■■□□□ 1.09
Hdac1O09106 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Hdac1O09106 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Hdac1O09106 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Hdac1O09106 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Hdac1O09106 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Hdac1O09106 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Hdac1O09106 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
Hdac1O09106 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Hdac1O09106 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Hdac1O09106 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Hdac1O09106 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Hdac1O09106 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Hdac1O09106 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Hdac1O09106 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Hdac1O09106 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Hdac1O09106 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Hdac1O09106 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Hdac1O09106 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Hdac1O09106 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC21.86■■□□□ 1.09
Hdac1O09106 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Hdac1O09106 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Hdac1O09106 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC21.86■■□□□ 1.09
Hdac1O09106 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.86■■□□□ 1.09
Hdac1O09106 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Hdac1O09106 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC21.86■■□□□ 1.09
Hdac1O09106 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Hdac1O09106 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Hdac1O09106 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC21.85■■□□□ 1.09
Hdac1O09106 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Hdac1O09106 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Hdac1O09106 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 90.7 ms