Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Rbfox1Q9JJ43 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.04■□□□□ 0.96
Rbfox1Q9JJ43 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Rbfox1Q9JJ43 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rbfox1Q9JJ43 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rbfox1Q9JJ43 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rbfox1Q9JJ43 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC21■□□□□ 0.95
Rbfox1Q9JJ43 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rbfox1Q9JJ43 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rbfox1Q9JJ43 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rbfox1Q9JJ43 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
Rbfox1Q9JJ43 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rbfox1Q9JJ43 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rbfox1Q9JJ43 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rbfox1Q9JJ43 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rbfox1Q9JJ43 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.96■□□□□ 0.95
Rbfox1Q9JJ43 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rbfox1Q9JJ43 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
Rbfox1Q9JJ43 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Rbfox1Q9JJ43 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.95■□□□□ 0.94
Rbfox1Q9JJ43 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rbfox1Q9JJ43 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rbfox1Q9JJ43 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.93■□□□□ 0.94
Rbfox1Q9JJ43 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Rbfox1Q9JJ43 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Rbfox1Q9JJ43 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.92■□□□□ 0.94
Rbfox1Q9JJ43 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.92■□□□□ 0.94
Rbfox1Q9JJ43 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rbfox1Q9JJ43 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rbfox1Q9JJ43 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rbfox1Q9JJ43 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rbfox1Q9JJ43 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.9■□□□□ 0.94
Rbfox1Q9JJ43 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rbfox1Q9JJ43 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rbfox1Q9JJ43 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rbfox1Q9JJ43 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.89■□□□□ 0.93
Rbfox1Q9JJ43 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rbfox1Q9JJ43 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rbfox1Q9JJ43 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rbfox1Q9JJ43 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Rbfox1Q9JJ43 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rbfox1Q9JJ43 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rbfox1Q9JJ43 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rbfox1Q9JJ43 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Rbfox1Q9JJ43 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Rbfox1Q9JJ43 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Rbfox1Q9JJ43 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rbfox1Q9JJ43 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rbfox1Q9JJ43 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rbfox1Q9JJ43 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Rbfox1Q9JJ43 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rbfox1Q9JJ43 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Rbfox1Q9JJ43 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rbfox1Q9JJ43 Gm24804-201ENSMUST00000174982 85 ntBASIC20.82■□□□□ 0.92
Rbfox1Q9JJ43 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rbfox1Q9JJ43 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Rbfox1Q9JJ43 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rbfox1Q9JJ43 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rbfox1Q9JJ43 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Rbfox1Q9JJ43 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rbfox1Q9JJ43 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rbfox1Q9JJ43 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rbfox1Q9JJ43 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rbfox1Q9JJ43 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rbfox1Q9JJ43 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rbfox1Q9JJ43 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rbfox1Q9JJ43 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Rbfox1Q9JJ43 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rbfox1Q9JJ43 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rbfox1Q9JJ43 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rbfox1Q9JJ43 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Rbfox1Q9JJ43 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.77■□□□□ 0.92
Rbfox1Q9JJ43 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rbfox1Q9JJ43 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rbfox1Q9JJ43 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rbfox1Q9JJ43 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rbfox1Q9JJ43 Gm16148-201ENSMUST00000119653 893 ntBASIC20.75■□□□□ 0.91
Rbfox1Q9JJ43 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rbfox1Q9JJ43 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rbfox1Q9JJ43 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rbfox1Q9JJ43 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rbfox1Q9JJ43 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rbfox1Q9JJ43 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.73■□□□□ 0.91
Rbfox1Q9JJ43 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Rbfox1Q9JJ43 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rbfox1Q9JJ43 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rbfox1Q9JJ43 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rbfox1Q9JJ43 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rbfox1Q9JJ43 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rbfox1Q9JJ43 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rbfox1Q9JJ43 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rbfox1Q9JJ43 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Rbfox1Q9JJ43 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rbfox1Q9JJ43 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rbfox1Q9JJ43 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rbfox1Q9JJ43 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rbfox1Q9JJ43 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rbfox1Q9JJ43 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rbfox1Q9JJ43 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rbfox1Q9JJ43 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 8.6 ms