Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC30.04■■■□□ 2.4
Upf1Q9EPU0 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
Upf1Q9EPU0 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC30.01■■■□□ 2.39
Upf1Q9EPU0 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC30.01■■■□□ 2.39
Upf1Q9EPU0 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC30■■■□□ 2.39
Upf1Q9EPU0 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC30■■■□□ 2.39
Upf1Q9EPU0 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC30■■■□□ 2.39
Upf1Q9EPU0 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Upf1Q9EPU0 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Upf1Q9EPU0 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC29.99■■■□□ 2.39
Upf1Q9EPU0 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
Upf1Q9EPU0 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Upf1Q9EPU0 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
Upf1Q9EPU0 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
Upf1Q9EPU0 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
Upf1Q9EPU0 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
Upf1Q9EPU0 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC29.91■■■□□ 2.38
Upf1Q9EPU0 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Upf1Q9EPU0 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC29.88■■■□□ 2.37
Upf1Q9EPU0 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC29.87■■■□□ 2.37
Upf1Q9EPU0 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
Upf1Q9EPU0 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Upf1Q9EPU0 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
Upf1Q9EPU0 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC29.81■■■□□ 2.36
Upf1Q9EPU0 Gm6311-201ENSMUST00000073790 878 ntBASIC29.81■■■□□ 2.36
Upf1Q9EPU0 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC29.8■■■□□ 2.36
Upf1Q9EPU0 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Upf1Q9EPU0 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Upf1Q9EPU0 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
Upf1Q9EPU0 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Upf1Q9EPU0 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
Upf1Q9EPU0 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC29.74■■■□□ 2.35
Upf1Q9EPU0 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC29.74■■■□□ 2.35
Upf1Q9EPU0 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC29.74■■■□□ 2.35
Upf1Q9EPU0 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC29.73■■■□□ 2.35
Upf1Q9EPU0 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC29.72■■■□□ 2.35
Upf1Q9EPU0 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC29.72■■■□□ 2.35
Upf1Q9EPU0 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
Upf1Q9EPU0 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC29.71■■■□□ 2.35
Upf1Q9EPU0 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC29.71■■■□□ 2.35
Upf1Q9EPU0 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC29.71■■■□□ 2.35
Upf1Q9EPU0 Gm22567-201ENSMUST00000175542 342 ntBASIC29.7■■■□□ 2.35
Upf1Q9EPU0 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Upf1Q9EPU0 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC29.69■■■□□ 2.34
Upf1Q9EPU0 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Upf1Q9EPU0 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
Upf1Q9EPU0 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
Upf1Q9EPU0 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC29.69■■■□□ 2.34
Upf1Q9EPU0 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
Upf1Q9EPU0 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC29.67■■■□□ 2.34
Upf1Q9EPU0 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC29.66■■■□□ 2.34
Upf1Q9EPU0 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
Upf1Q9EPU0 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC29.65■■■□□ 2.34
Upf1Q9EPU0 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Upf1Q9EPU0 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
Upf1Q9EPU0 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC29.63■■■□□ 2.33
Upf1Q9EPU0 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
Upf1Q9EPU0 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Upf1Q9EPU0 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC29.62■■■□□ 2.33
Upf1Q9EPU0 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Upf1Q9EPU0 AC167019.3-201ENSMUST00000228225 1266 ntBASIC29.61■■■□□ 2.33
Upf1Q9EPU0 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Upf1Q9EPU0 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC29.61■■■□□ 2.33
Upf1Q9EPU0 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
Upf1Q9EPU0 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Upf1Q9EPU0 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Upf1Q9EPU0 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC29.6■■■□□ 2.33
Upf1Q9EPU0 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC29.6■■■□□ 2.33
Upf1Q9EPU0 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC29.58■■■□□ 2.33
Upf1Q9EPU0 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
Upf1Q9EPU0 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC29.55■■■□□ 2.32
Upf1Q9EPU0 Gm12366-201ENSMUST00000121722 873 ntBASIC29.55■■■□□ 2.32
Upf1Q9EPU0 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC29.55■■■□□ 2.32
Upf1Q9EPU0 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC29.55■■■□□ 2.32
Upf1Q9EPU0 Gm5786-201ENSMUST00000085368 882 ntBASIC29.55■■■□□ 2.32
Upf1Q9EPU0 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Upf1Q9EPU0 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Upf1Q9EPU0 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC29.54■■■□□ 2.32
Upf1Q9EPU0 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC29.52■■■□□ 2.32
Upf1Q9EPU0 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Upf1Q9EPU0 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Upf1Q9EPU0 AC131739.1-201ENSMUST00000221692 1245 ntBASIC29.5■■■□□ 2.31
Upf1Q9EPU0 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Upf1Q9EPU0 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC29.5■■■□□ 2.31
Upf1Q9EPU0 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC29.5■■■□□ 2.31
Upf1Q9EPU0 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Upf1Q9EPU0 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
Upf1Q9EPU0 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC29.47■■■□□ 2.31
Upf1Q9EPU0 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC29.47■■■□□ 2.31
Upf1Q9EPU0 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
Upf1Q9EPU0 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC29.47■■■□□ 2.31
Upf1Q9EPU0 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC29.46■■■□□ 2.31
Upf1Q9EPU0 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
Upf1Q9EPU0 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
Upf1Q9EPU0 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC29.44■■■□□ 2.3
Upf1Q9EPU0 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC29.43■■■□□ 2.3
Upf1Q9EPU0 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Upf1Q9EPU0 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC29.42■■■□□ 2.3
Upf1Q9EPU0 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Upf1Q9EPU0 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC29.41■■■□□ 2.3
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms