Protein–RNA interactions for Protein: Q9D3I8

Rhox4a, Reproductive homeobox 4A, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox4aQ9D3I8 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Rhox4aQ9D3I8 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.19■□□□□ 0.82
Rhox4aQ9D3I8 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rhox4aQ9D3I8 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Rhox4aQ9D3I8 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rhox4aQ9D3I8 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Rhox4aQ9D3I8 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rhox4aQ9D3I8 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.17■□□□□ 0.82
Rhox4aQ9D3I8 Gm25262-201ENSMUST00000174934 133 ntBASIC20.16■□□□□ 0.82
Rhox4aQ9D3I8 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rhox4aQ9D3I8 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rhox4aQ9D3I8 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rhox4aQ9D3I8 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rhox4aQ9D3I8 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rhox4aQ9D3I8 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rhox4aQ9D3I8 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.14■□□□□ 0.81
Rhox4aQ9D3I8 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rhox4aQ9D3I8 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rhox4aQ9D3I8 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rhox4aQ9D3I8 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rhox4aQ9D3I8 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rhox4aQ9D3I8 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rhox4aQ9D3I8 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rhox4aQ9D3I8 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
Rhox4aQ9D3I8 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rhox4aQ9D3I8 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rhox4aQ9D3I8 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rhox4aQ9D3I8 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rhox4aQ9D3I8 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
Rhox4aQ9D3I8 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC20.09■□□□□ 0.81
Rhox4aQ9D3I8 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
Rhox4aQ9D3I8 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rhox4aQ9D3I8 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rhox4aQ9D3I8 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Rhox4aQ9D3I8 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rhox4aQ9D3I8 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rhox4aQ9D3I8 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rhox4aQ9D3I8 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rhox4aQ9D3I8 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rhox4aQ9D3I8 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rhox4aQ9D3I8 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rhox4aQ9D3I8 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
Rhox4aQ9D3I8 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rhox4aQ9D3I8 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rhox4aQ9D3I8 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rhox4aQ9D3I8 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Rhox4aQ9D3I8 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rhox4aQ9D3I8 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rhox4aQ9D3I8 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rhox4aQ9D3I8 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rhox4aQ9D3I8 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rhox4aQ9D3I8 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Rhox4aQ9D3I8 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rhox4aQ9D3I8 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rhox4aQ9D3I8 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC19.99■□□□□ 0.79
Rhox4aQ9D3I8 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rhox4aQ9D3I8 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rhox4aQ9D3I8 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Rhox4aQ9D3I8 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rhox4aQ9D3I8 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rhox4aQ9D3I8 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rhox4aQ9D3I8 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rhox4aQ9D3I8 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Rhox4aQ9D3I8 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.95■□□□□ 0.78
Rhox4aQ9D3I8 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rhox4aQ9D3I8 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rhox4aQ9D3I8 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rhox4aQ9D3I8 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rhox4aQ9D3I8 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Rhox4aQ9D3I8 AC166822.3-201ENSMUST00000227394 661 ntBASIC19.93■□□□□ 0.78
Rhox4aQ9D3I8 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rhox4aQ9D3I8 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rhox4aQ9D3I8 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rhox4aQ9D3I8 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rhox4aQ9D3I8 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rhox4aQ9D3I8 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rhox4aQ9D3I8 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rhox4aQ9D3I8 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rhox4aQ9D3I8 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Rhox4aQ9D3I8 Gm27322-201ENSMUST00000184007 104 ntBASIC19.89■□□□□ 0.77
Rhox4aQ9D3I8 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC19.89■□□□□ 0.77
Rhox4aQ9D3I8 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rhox4aQ9D3I8 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rhox4aQ9D3I8 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rhox4aQ9D3I8 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Rhox4aQ9D3I8 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rhox4aQ9D3I8 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rhox4aQ9D3I8 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rhox4aQ9D3I8 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Rhox4aQ9D3I8 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rhox4aQ9D3I8 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Rhox4aQ9D3I8 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rhox4aQ9D3I8 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Rhox4aQ9D3I8 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rhox4aQ9D3I8 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rhox4aQ9D3I8 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rhox4aQ9D3I8 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rhox4aQ9D3I8 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Rhox4aQ9D3I8 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rhox4aQ9D3I8 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 106 ms