Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC31.83■■■□□ 2.69
Nip7Q9CXK8 Gm30346-201ENSMUST00000218641 1699 ntBASIC31.83■■■□□ 2.69
Nip7Q9CXK8 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC31.82■■■□□ 2.68
Nip7Q9CXK8 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC31.81■■■□□ 2.68
Nip7Q9CXK8 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC31.81■■■□□ 2.68
Nip7Q9CXK8 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC31.81■■■□□ 2.68
Nip7Q9CXK8 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC31.8■■■□□ 2.68
Nip7Q9CXK8 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Nip7Q9CXK8 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC31.78■■■□□ 2.68
Nip7Q9CXK8 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
Nip7Q9CXK8 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Nip7Q9CXK8 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Nip7Q9CXK8 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC31.72■■■□□ 2.67
Nip7Q9CXK8 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Nip7Q9CXK8 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
Nip7Q9CXK8 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC31.71■■■□□ 2.67
Nip7Q9CXK8 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
Nip7Q9CXK8 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Nip7Q9CXK8 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Nip7Q9CXK8 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
Nip7Q9CXK8 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC31.7■■■□□ 2.67
Nip7Q9CXK8 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Nip7Q9CXK8 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Nip7Q9CXK8 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC31.68■■■□□ 2.66
Nip7Q9CXK8 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
Nip7Q9CXK8 Nkain2-201ENSMUST00000092602 558 ntBASIC31.67■■■□□ 2.66
Nip7Q9CXK8 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC31.64■■■□□ 2.66
Nip7Q9CXK8 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
Nip7Q9CXK8 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC31.63■■■□□ 2.65
Nip7Q9CXK8 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
Nip7Q9CXK8 Gm6658-202ENSMUST00000209493 1885 ntBASIC31.62■■■□□ 2.65
Nip7Q9CXK8 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC31.62■■■□□ 2.65
Nip7Q9CXK8 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
Nip7Q9CXK8 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
Nip7Q9CXK8 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC31.6■■■□□ 2.65
Nip7Q9CXK8 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Nip7Q9CXK8 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Nip7Q9CXK8 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Nip7Q9CXK8 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Nip7Q9CXK8 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Nip7Q9CXK8 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC31.55■■■□□ 2.64
Nip7Q9CXK8 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC31.55■■■□□ 2.64
Nip7Q9CXK8 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Nip7Q9CXK8 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
Nip7Q9CXK8 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Nip7Q9CXK8 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Nip7Q9CXK8 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
Nip7Q9CXK8 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
Nip7Q9CXK8 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC31.52■■■□□ 2.64
Nip7Q9CXK8 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Nip7Q9CXK8 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
Nip7Q9CXK8 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC31.49■■■□□ 2.63
Nip7Q9CXK8 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC31.49■■■□□ 2.63
Nip7Q9CXK8 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
Nip7Q9CXK8 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
Nip7Q9CXK8 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
Nip7Q9CXK8 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Nip7Q9CXK8 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC31.46■■■□□ 2.63
Nip7Q9CXK8 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
Nip7Q9CXK8 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
Nip7Q9CXK8 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC31.42■■■□□ 2.62
Nip7Q9CXK8 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC31.42■■■□□ 2.62
Nip7Q9CXK8 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Nip7Q9CXK8 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC31.41■■■□□ 2.62
Nip7Q9CXK8 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC31.4■■■□□ 2.62
Nip7Q9CXK8 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Nip7Q9CXK8 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Nip7Q9CXK8 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Nip7Q9CXK8 Gm7432-201ENSMUST00000210343 879 ntBASIC31.36■■■□□ 2.61
Nip7Q9CXK8 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Nip7Q9CXK8 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC31.32■■■□□ 2.6
Nip7Q9CXK8 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC31.32■■■□□ 2.6
Nip7Q9CXK8 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
Nip7Q9CXK8 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
Nip7Q9CXK8 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC31.28■■■□□ 2.6
Nip7Q9CXK8 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC31.28■■■□□ 2.6
Nip7Q9CXK8 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
Nip7Q9CXK8 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Nip7Q9CXK8 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC31.27■■■□□ 2.6
Nip7Q9CXK8 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC31.26■■■□□ 2.6
Nip7Q9CXK8 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Nip7Q9CXK8 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Nip7Q9CXK8 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC31.25■■■□□ 2.59
Nip7Q9CXK8 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
Nip7Q9CXK8 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
Nip7Q9CXK8 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
Nip7Q9CXK8 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
Nip7Q9CXK8 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
Nip7Q9CXK8 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC31.18■■■□□ 2.58
Nip7Q9CXK8 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Nip7Q9CXK8 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Nip7Q9CXK8 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC31.15■■■□□ 2.58
Nip7Q9CXK8 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC31.14■■■□□ 2.58
Nip7Q9CXK8 Gm11599-201ENSMUST00000118720 878 ntBASIC31.14■■■□□ 2.58
Nip7Q9CXK8 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Nip7Q9CXK8 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
Nip7Q9CXK8 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC31.12■■■□□ 2.57
Nip7Q9CXK8 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC31.11■■■□□ 2.57
Nip7Q9CXK8 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC31.11■■■□□ 2.57
Nip7Q9CXK8 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms