Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC31.84■■■□□ 2.69
RtcbQ99LF4 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
RtcbQ99LF4 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
RtcbQ99LF4 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC31.82■■■□□ 2.68
RtcbQ99LF4 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC31.82■■■□□ 2.68
RtcbQ99LF4 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC31.79■■■□□ 2.68
RtcbQ99LF4 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
RtcbQ99LF4 Gm7432-201ENSMUST00000210343 879 ntBASIC31.76■■■□□ 2.67
RtcbQ99LF4 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC31.74■■■□□ 2.67
RtcbQ99LF4 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC31.73■■■□□ 2.67
RtcbQ99LF4 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
RtcbQ99LF4 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC31.72■■■□□ 2.67
RtcbQ99LF4 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC31.72■■■□□ 2.67
RtcbQ99LF4 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC31.72■■■□□ 2.67
RtcbQ99LF4 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC31.72■■■□□ 2.67
RtcbQ99LF4 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC31.7■■■□□ 2.67
RtcbQ99LF4 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
RtcbQ99LF4 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
RtcbQ99LF4 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
RtcbQ99LF4 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
RtcbQ99LF4 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
RtcbQ99LF4 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
RtcbQ99LF4 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
RtcbQ99LF4 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
RtcbQ99LF4 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC31.64■■■□□ 2.66
RtcbQ99LF4 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
RtcbQ99LF4 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
RtcbQ99LF4 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC31.61■■■□□ 2.65
RtcbQ99LF4 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
RtcbQ99LF4 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
RtcbQ99LF4 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
RtcbQ99LF4 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
RtcbQ99LF4 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
RtcbQ99LF4 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
RtcbQ99LF4 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC31.56■■■□□ 2.64
RtcbQ99LF4 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
RtcbQ99LF4 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
RtcbQ99LF4 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC31.55■■■□□ 2.64
RtcbQ99LF4 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC31.55■■■□□ 2.64
RtcbQ99LF4 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
RtcbQ99LF4 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC31.54■■■□□ 2.64
RtcbQ99LF4 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC31.53■■■□□ 2.64
RtcbQ99LF4 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
RtcbQ99LF4 Gm30346-201ENSMUST00000218641 1699 ntBASIC31.52■■■□□ 2.64
RtcbQ99LF4 Gm11599-201ENSMUST00000118720 878 ntBASIC31.5■■■□□ 2.63
RtcbQ99LF4 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC31.48■■■□□ 2.63
RtcbQ99LF4 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC31.47■■■□□ 2.63
RtcbQ99LF4 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
RtcbQ99LF4 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC31.46■■■□□ 2.63
RtcbQ99LF4 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC31.45■■■□□ 2.63
RtcbQ99LF4 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
RtcbQ99LF4 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC31.44■■■□□ 2.62
RtcbQ99LF4 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC31.44■■■□□ 2.62
RtcbQ99LF4 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
RtcbQ99LF4 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
RtcbQ99LF4 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
RtcbQ99LF4 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
RtcbQ99LF4 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
RtcbQ99LF4 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC31.39■■■□□ 2.62
RtcbQ99LF4 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
RtcbQ99LF4 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC31.37■■■□□ 2.61
RtcbQ99LF4 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
RtcbQ99LF4 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
RtcbQ99LF4 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
RtcbQ99LF4 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
RtcbQ99LF4 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC31.34■■■□□ 2.61
RtcbQ99LF4 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC31.33■■■□□ 2.61
RtcbQ99LF4 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
RtcbQ99LF4 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC31.32■■■□□ 2.6
RtcbQ99LF4 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC31.3■■■□□ 2.6
RtcbQ99LF4 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC31.3■■■□□ 2.6
RtcbQ99LF4 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
RtcbQ99LF4 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
RtcbQ99LF4 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC31.27■■■□□ 2.6
RtcbQ99LF4 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
RtcbQ99LF4 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC31.26■■■□□ 2.59
RtcbQ99LF4 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
RtcbQ99LF4 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
RtcbQ99LF4 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
RtcbQ99LF4 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
RtcbQ99LF4 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC31.22■■■□□ 2.59
RtcbQ99LF4 Mir6538-201ENSMUST00000183713 110 ntBASIC31.22■■■□□ 2.59
RtcbQ99LF4 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
RtcbQ99LF4 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
RtcbQ99LF4 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC31.2■■■□□ 2.59
RtcbQ99LF4 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
RtcbQ99LF4 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
RtcbQ99LF4 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
RtcbQ99LF4 Gm11175-201ENSMUST00000116172 543 ntBASIC31.18■■■□□ 2.58
RtcbQ99LF4 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC31.18■■■□□ 2.58
RtcbQ99LF4 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC31.17■■■□□ 2.58
RtcbQ99LF4 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
RtcbQ99LF4 Gm2415-204ENSMUST00000190235 2004 ntBASIC31.17■■■□□ 2.58
RtcbQ99LF4 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
RtcbQ99LF4 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
RtcbQ99LF4 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC31.16■■■□□ 2.58
RtcbQ99LF4 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC31.16■■■□□ 2.58
RtcbQ99LF4 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
RtcbQ99LF4 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
RtcbQ99LF4 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC31.15■■■□□ 2.58
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms